RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 C2orf74A8MZ97 194 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 BLOC1S5-TXNDC5H3BN57 136 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 H3BSH0 61 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 DCTN6O00399 190 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 ARPC3O15145 178 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 KRT33AO76009 404 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 IFNA7P01567 189 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 ANXA7P20073 488 aaKnown RBP12.62□□□□□ -0.39
PHGDH-233ENST00000642021 CDK2P24941 298 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 AQP2P41181 271 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 SOX2P48431 317 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 P2RX1P51575 399 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 RAB38P57729 211 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 TSPAN5P62079 268 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 ZNF141Q15928 474 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 ZNF542PQ5EBM4 170 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 TCTE1Q5JU00 501 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 LEG1Q6P5S2 330 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 RIT1Q92963 219 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 C3orf49Q96BT1 292 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 SIPA1Q96FS4 1042 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 LMF1Q96S06 567 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 ALG12Q9BV10 488 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 CPNE7Q9UBL6 633 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 UBQLN2Q9UHD9 624 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 TMEM72A0PK05 275 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 KHDRBS3O75525 346 aaKnown RBP12.62□□□□□ -0.39
PHGDH-233ENST00000642021 CSTAP01040 98 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 CT45A8P0DMV1 189 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 CT45A9P0DMV2 189 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 ZNHIT3Q15649 155 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-233ENST00000642021 CT45A2Q5DJT8 189 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 STAC2Q6ZMT1 411 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 IDO2Q6ZQW0 420 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 ZNF550Q7Z398 422 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 SLC43A2Q8N370 569 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 GATSQ8NAP1 163 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 C1orf216Q8TAB5 229 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 FCAMRQ8WWV6 532 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 ZNF524Q96C55 264 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 LRFN5Q96NI6 719 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 HCN3Q9P1Z3 774 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 EML5Q05BV3 1969 aa12.62□□□□□ -0.39
PHGDH-233ENST00000642021 A0A0A6YYC8 382 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-233ENST00000642021 I3L1I5 382 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-233ENST00000642021 GLCEO94923 617 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 KLF8O95600 359 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-233ENST00000642021 APBB3O95704 486 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 ALDOBP05062 364 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 ATXN8OSP0DMR3 200 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 M6PRP20645 277 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 RPS27P42677 84 aaKnown RBP12.61□□□□□ -0.39
PHGDH-233ENST00000642021 TNFRSF4P43489 277 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 GPR143P51810 404 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 BTG2P78543 158 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 MAT1AQ00266 395 aaKnown RBP12.61□□□□□ -0.39
PHGDH-233ENST00000642021 ZNF267Q14586 743 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-233ENST00000642021 AANATQ16613 207 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 TMEM69Q5SWH9 247 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 LRRC20Q8TCA0 184 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 MSANTD3Q96H12 275 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 RBM18Q96H35 190 aaKnown RBP12.61□□□□□ -0.39
PHGDH-233ENST00000642021 SEMA4CQ9C0C4 833 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 FRRS1LQ9P0K9 344 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 MRM2Q9UI43 246 aaKnown RBP12.61□□□□□ -0.39
PHGDH-233ENST00000642021 ZNF337Q9Y3M9 751 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 A0A0J9YY10 115 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 ANKRD20A5PA0PJZ0 165 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 UPK3AO75631 287 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 OR7A10O76100 309 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 ST6GAL1P15907 406 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 CXCL2P19875 107 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 CENPAP49450 140 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 RPS4XP62701 263 aaKnown RBP12.61□□□□□ -0.39
PHGDH-233ENST00000642021 STX4Q12846 297 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 LIPNQ5VXI9 398 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 GLDNQ6ZMI3 551 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-233ENST00000642021 SLC35F3Q8IY50 421 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-233ENST00000642021 FAM71CQ8NEG0 241 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 PHYHIPQ92561 330 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 S100A16Q96FQ6 103 aaKnown RBP12.61□□□□□ -0.39
PHGDH-233ENST00000642021 MOGAT1Q96PD6 335 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 CCDC3Q9BQI4 270 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 C1QTNF6Q9BXI9 259 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 MGAT4CQ9UBM8 478 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 CACNA1IQ9P0X4 2223 aa12.61□□□□□ -0.39
PHGDH-233ENST00000642021 A0A1B0GUH1 482 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 M0R233 179 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 PDCD5O14737 125 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 RGS11O94810 467 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 ECDO95905 644 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-233ENST00000642021 MFSD13AQ14CX5 517 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 CSRP2Q16527 193 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 SLC35D3Q5M8T2 416 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 ELFN2Q5R3F8 820 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 METTL11BQ5VVY1 283 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 ARHGEF39Q8N4T4 335 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 OR10AC1Q8NH08 325 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 HAVCR1Q96D42 359 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms