RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 C16orf97H3BN30 126 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 TRAF3IP2O43734 574 aaPredicted RBP17.95■□□□□ 0.46
PTCD3-220ENST00000627371 OR6A2O95222 327 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 GADD45GO95257 159 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 POU3F1Q03052 451 aaPredicted RBP17.95■□□□□ 0.46
PTCD3-220ENST00000627371 ZP4Q12836 540 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 FBXW9Q5XUX1 488 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 TBPL2Q6SJ96 375 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 STAC2Q6ZMT1 411 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 ASRGL1Q7L266 308 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 PXKQ7Z7A4 578 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 FUZQ9BT04 418 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 TAS2R5Q9NYW4 299 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.95■□□□□ 0.46
PTCD3-220ENST00000627371 MALT1Q9UDY8 824 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 RCE1Q9Y256 329 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 NOX1Q9Y5S8 564 aa17.95■□□□□ 0.46
PTCD3-220ENST00000627371 TRBV4-1A0A0J9YWV2 114 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 TUBAL3A6NHL2 446 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 C11orf98E9PRG8 122 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 ADAP00813 363 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 IGHV3-9P01782 118 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 TSPAN19P0C672 248 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 RAP2AP10114 183 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 HLA-DOBP13765 273 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 PSMB1P20618 241 aaKnown RBP17.94■□□□□ 0.46
PTCD3-220ENST00000627371 AHCYP23526 432 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 RRM2P31350 389 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 KIR2DL3P43628 341 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 CLDN17P56750 224 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 P2RY6Q15077 328 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 NIPAL3Q6P499 406 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 NHLRC1Q6VVB1 395 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 RRM2BQ7LG56 351 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 CXorf67Q86X51 503 aaPredicted RBP17.94■□□□□ 0.46
PTCD3-220ENST00000627371 ADGRG5Q8IZF4 528 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 OR52J3Q8NH60 311 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 MARVELD3Q96A59 401 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 SLCO5A1Q9H2Y9 848 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 KCNN3Q9UGI6 736 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 GPR52Q9Y2T5 361 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 CELSR2Q9HCU4 2923 aa17.94■□□□□ 0.46
PTCD3-220ENST00000627371 CENPEQ02224 2701 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 DHRS12A0PJE2 317 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 AKAP8O43823 692 aaKnown RBP17.93■□□□□ 0.46
PTCD3-220ENST00000627371 HOXB6P17509 224 aaKnown RBP17.93■□□□□ 0.46
PTCD3-220ENST00000627371 COX5AP20674 150 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 MAKP20794 623 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 SELENOPP49908 381 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 RPL18Q07020 188 aaKnown RBP17.93■□□□□ 0.46
PTCD3-220ENST00000627371 ITGADQ13349 1161 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 SEC23BQ15437 767 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 SFRP5Q5T4F7 317 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 TSPO2Q5TGU0 170 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 SPATA24Q86W54 205 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 CDK20Q8IZL9 346 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 UBE2J2Q8N2K1 259 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 POMGNT2Q8NAT1 580 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 ANKK1Q8NFD2 765 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 OR10A4Q9H209 315 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 ASB6Q9NWX5 421 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 CRIM1Q9NZV1 1036 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 TMEM5Q9Y2B1 443 aa17.93■□□□□ 0.46
PTCD3-220ENST00000627371 UNC79Q9P2D8 2635 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 TCRBV3S1A0A5B6 114 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 SH3PXD2BA1X283 911 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 OR6C65A6NJZ3 312 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 EFCAB9A8MZ26 197 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 BLOC1S5-TXNDC5H3BN57 136 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 RNF13O43567 381 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 KRT36O76013 467 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 ZNF432O94892 652 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 SAGP10523 405 aaPredicted RBP17.92■□□□□ 0.46
PTCD3-220ENST00000627371 IGHV1-2P23083 117 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 TMPRSS11FQ6ZWK6 438 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 OR4K5Q8NGD3 323 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 LINC01560Q8TB33 94 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 FAM222BQ8WU58 562 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 CANT1Q8WVQ1 401 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 KISS1RQ969F8 398 aaPredicted RBP17.92■□□□□ 0.46
PTCD3-220ENST00000627371 DACH2Q96NX9 599 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 HDHD5Q9BXW7 423 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 KRCC1Q9NPI7 259 aaPredicted RBP17.92■□□□□ 0.46
PTCD3-220ENST00000627371 SLC7A10Q9NS82 523 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 UPB1Q9UBR1 384 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 NDRG3Q9UGV2 375 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 AURKCQ9UQB9 309 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 HIF3AQ9Y2N7 669 aa17.92■□□□□ 0.46
PTCD3-220ENST00000627371 DCHS2Q6V1P9 2916 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 SH3D21A4FU49 640 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 PDLIM1O00151 329 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 SERPINI2O75830 405 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 AQP2P41181 271 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 GPR4P46093 362 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 OMPP47874 163 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 SLC9A3P48764 834 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 RPS4XP62701 263 aaKnown RBP17.91■□□□□ 0.46
PTCD3-220ENST00000627371 FAPQ12884 760 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 MEX3DQ86XN8 651 aaKnown RBP17.91■□□□□ 0.46
PTCD3-220ENST00000627371 FAM46AQ96IP4 442 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms