RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 FOXN4Q96NZ1 517 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 CNN2Q99439 309 aaKnown RBP13.92□□□□□ -0.18
PMS1-221ENST00000624204 KLHL31Q9H511 634 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 CALML5Q9NZT1 146 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 GREM1O60565 184 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 PRKAR1BP31321 381 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 AMZ1Q400G9 498 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 LCTLQ6UWM7 567 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 NAA40Q86UY6 237 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 RANBP3LQ86VV4 465 aaPredicted RBP13.92□□□□□ -0.18
PMS1-221ENST00000624204 SLC35F2Q8IXU6 374 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 OR2A12Q8NGT7 310 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 OR6N1Q8NGY5 312 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 CMTM3Q96MX0 182 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 TNFRSF13CQ96RJ3 184 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 TRPV4Q9HBA0 871 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 MEPEQ9NQ76 525 aaPredicted RBP13.92□□□□□ -0.18
PMS1-221ENST00000624204 TM7SF3Q9NS93 570 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 TRAPPC13A5PLN9 417 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 ANXA2P07355 339 aaKnown RBP13.92□□□□□ -0.18
PMS1-221ENST00000624204 OR4E1P0C645 316 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 LAMP2P13473 410 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 MECP2P51608 486 aaKnown RBP13.92□□□□□ -0.18
PMS1-221ENST00000624204 PEA15Q15121 130 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 ZNF836Q6ZNA1 936 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 KCTD9Q7L273 389 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 FOXRED2Q8IWF2 684 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 OR1J4Q8NGS1 313 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 OR10R2Q8NGX6 335 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 ULBP3Q9BZM4 244 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 PARP12Q9H0J9 701 aaKnown RBP13.92□□□□□ -0.18
PMS1-221ENST00000624204 C2orf42Q9NWW7 574 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 GHRLQ9UBU3 117 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 HS3ST2Q9Y278 367 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 RPH3AQ9Y2J0 694 aaPredicted RBP13.92□□□□□ -0.18
PMS1-221ENST00000624204 SLC22A7Q9Y694 548 aa13.92□□□□□ -0.18
PMS1-221ENST00000624204 C13orf42A0A1B0GVH6 325 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 H7C417 338 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 EMC8O43402 210 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 GLSO94925 669 aaPredicted RBP13.91□□□□□ -0.18
PMS1-221ENST00000624204 PAPLNO95428 1278 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 RPN2P04844 631 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 EPCAMP16422 314 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 CSNK2A2P19784 350 aaPredicted RBP13.91□□□□□ -0.18
PMS1-221ENST00000624204 PTAFRP25105 342 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 RPL4P36578 427 aaKnown RBP13.91□□□□□ -0.18
PMS1-221ENST00000624204 ELAVL2Q12926 359 aaKnown RBP13.91□□□□□ -0.18
PMS1-221ENST00000624204 MPPED2Q15777 294 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 LY6G6FQ5SQ64 297 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 SLC35A4Q96G79 324 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 PRSS27Q9BQR3 290 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 RSRP1Q9BUV0 290 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 MTFP1Q9UDX5 166 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 SIGLEC7Q9Y286 467 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 RTTNQ86VV8 2226 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 A0A1B0GV50 99 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 A0A1W2PR48 441 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 EEF1E1-BLOC1S5C9J1V9 151 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 M0QYG6 137 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 ZFPL1O95159 310 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 IFNGP01579 166 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 GALTP07902 379 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 AKAIN1P0CW23 69 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 GABRR2P28476 465 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 SREBF2Q12772 1141 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 RAB33AQ14088 237 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 EIF2S3LQ2VIR3 472 aaKnown RBP13.91□□□□□ -0.18
PMS1-221ENST00000624204 ETV3LQ6ZN32 361 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 PGAP1Q75T13 922 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 PPP1R1CQ8WVI7 109 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 ARL11Q969Q4 196 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 ARL5BQ96KC2 179 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 HSPA12BQ96MM6 686 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 LMF1Q96S06 567 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 ZDHHC5Q9C0B5 715 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 CHRDQ9H2X0 955 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 MED31Q9Y3C7 131 aa13.91□□□□□ -0.18
PMS1-221ENST00000624204 POM121BA6NF01 834 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 C1orf196B1AJZ1 125 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 S100A8P05109 93 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 CSF1P09603 554 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 TIMP2P16035 220 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 CAPZA1P52907 286 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 ATP1B3P54709 279 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 SQSTM1Q13501 440 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 MLC1Q15049 377 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 TAF1CQ15572 869 aaPredicted RBP13.9□□□□□ -0.18
PMS1-221ENST00000624204 OR1Q1Q15612 314 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 PRAMEF17Q5VTA0 474 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 CORO6Q6QEF8 472 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 STAC2Q6ZMT1 411 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 Q6ZNB5 142 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 DPPA4Q7L190 304 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 INO80EQ8NBZ0 244 aaPredicted RBP13.9□□□□□ -0.18
PMS1-221ENST00000624204 ELP5Q8TE02 316 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 TFGQ92734 400 aaPredicted RBP13.9□□□□□ -0.18
PMS1-221ENST00000624204 ADAP2Q9NPF8 381 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 NCDNQ9UBB6 729 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 EPHA6Q9UF33 1036 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 TMEM82A0PJX8 343 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms