RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 FAM220AQ7Z4H9 259 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 TEX19Q8NA77 164 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 OR6K6Q8NGW6 343 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 NEIL3Q8TAT5 605 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 CHPT1Q8WUD6 406 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 ASB15Q8WXK1 588 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 ACOT12Q8WYK0 555 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 THRSPQ92748 146 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 TCEAL3Q969E4 200 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 RASD2Q96D21 266 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 NXPE2Q96DL1 559 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 ZMYND19Q96E35 227 aaPredicted RBP14.8□□□□□ -0.04
LDB3-208ENST00000623007 C4orf36Q96KX1 117 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 SGCZQ96LD1 299 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 CCDC32Q9BV29 185 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 SMURF1Q9HCE7 757 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 TAS2R5Q9NYW4 299 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 B3GALT5Q9Y2C3 310 aa14.8□□□□□ -0.04
LDB3-208ENST00000623007 J3QLW9 94 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 CASKO14936 926 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 GATBO75879 557 aaKnown RBP14.79□□□□□ -0.04
LDB3-208ENST00000623007 DLGAP3O95886 979 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 HPP00738 406 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 CLUP10909 449 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 ZNF19P17023 458 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 CRABP1P29762 137 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 CASP3P42574 277 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 CDKN2AP42771 156 aaKnown RBP14.79□□□□□ -0.04
LDB3-208ENST00000623007 TGM4P49221 684 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 DDI2Q5TDH0 399 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 C3orf33Q6P1S2 294 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 TRILQ7L0X0 811 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 ESX1Q8N693 406 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 OR11G2Q8NGC1 345 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 TMEM203Q969S6 136 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 TSPAN32Q96QS1 320 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 SLC30A2Q9BRI3 323 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 GPR87Q9BY21 358 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 SMOC1Q9H4F8 434 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 SNTG1Q9NSN8 517 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 ALKBH4Q9NXW9 302 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 ADAM30Q9UKF2 790 aa14.79□□□□□ -0.04
LDB3-208ENST00000623007 ANKRD33BA6NCL7 494 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 C21orf140B9A014 251 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 PLPP3O14495 311 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 OGG1O15527 345 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 SULT1C4O75897 302 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 MRPL3P09001 348 aaKnown RBP14.78□□□□□ -0.04
LDB3-208ENST00000623007 GRPRP30550 384 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 EGR3Q06889 387 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 DOC2BQ14184 412 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 PLPPR5Q32ZL2 321 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 EEF1A1P5Q5VTE0 462 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 DMKNQ6E0U4 476 aaPredicted RBP14.78□□□□□ -0.04
LDB3-208ENST00000623007 FAM199XQ6PEV8 388 aaPredicted RBP14.78□□□□□ -0.04
LDB3-208ENST00000623007 POMZP3Q6PJE2 187 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 H1FNTQ75WM6 255 aaPredicted RBP14.78□□□□□ -0.04
LDB3-208ENST00000623007 EXD3Q8N9H8 876 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 OR4K17Q8NGC6 315 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 SLC25A36Q96CQ1 311 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 KCTD12Q96CX2 325 aaKnown RBP14.78□□□□□ -0.04
LDB3-208ENST00000623007 KLHL15Q96M94 604 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 PHOX2BQ99453 314 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 TIMP4Q99727 224 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 TM9SF2Q99805 663 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 TMED9Q9BVK6 235 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 RNF167Q9H6Y7 350 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 MARCH7Q9H992 704 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 ISG20L2Q9H9L3 353 aaKnown RBP14.78□□□□□ -0.04
LDB3-208ENST00000623007 RPRD1BQ9NQG5 326 aaKnown RBP14.78□□□□□ -0.04
LDB3-208ENST00000623007 SACM1LQ9NTJ5 587 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 VSX1Q9NZR4 365 aaPredicted RBP14.78□□□□□ -0.04
LDB3-208ENST00000623007 ZNF346Q9UL40 294 aaKnown RBP14.78□□□□□ -0.04
LDB3-208ENST00000623007 TCFL5Q9UL49 500 aa14.78□□□□□ -0.04
LDB3-208ENST00000623007 ZC3H12DA2A288 527 aaKnown RBP14.77□□□□□ -0.04
LDB3-208ENST00000623007 FTCDNL1E5RQL4 147 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 J3QRK9 145 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 AGRPO00253 132 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 CDK2AP1O14519 115 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 CDX4O14627 284 aaPredicted RBP14.77□□□□□ -0.04
LDB3-208ENST00000623007 LRP3O75074 770 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 ARL6IP5O75915 188 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 LALBAP00709 142 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 F13BP05160 661 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 GYPBP06028 91 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 MYL9P24844 172 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 PTBP1P26599 531 aaKnown RBP eCLIP14.77□□□□□ -0.04
LDB3-208ENST00000623007 SIRPAP78324 504 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 INSM1Q01101 510 aaPredicted RBP14.77□□□□□ -0.04
LDB3-208ENST00000623007 PUDPQ08623 228 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 CHAF1BQ13112 559 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 SELENBP1Q13228 472 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 LINC01590Q5TEZ4 76 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 Q6ZNX1 250 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 CCDC190Q86UF4 302 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 RPS19BP1Q86WX3 136 aaKnown RBP14.77□□□□□ -0.04
LDB3-208ENST00000623007 MARCH9Q86YJ5 346 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 FADS6Q8N9I5 356 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 OR10G3Q8NGC4 313 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 SMIM19Q96E16 107 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms