RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 ZNF613Q6PF04 617 aa13.96□□□□□ -0.17
DDB2-216ENST00000622878 CCDC80Q76M96 950 aa13.96□□□□□ -0.17
DDB2-216ENST00000622878 PATL1Q86TB9 770 aaKnown RBP13.96□□□□□ -0.17
DDB2-216ENST00000622878 TSPYL5Q86VY4 417 aaPredicted RBP13.96□□□□□ -0.17
DDB2-216ENST00000622878 CALHM3Q86XJ0 350 aa13.96□□□□□ -0.17
DDB2-216ENST00000622878 RBM45Q8IUH3 476 aaKnown RBP13.96□□□□□ -0.17
DDB2-216ENST00000622878 SLC30A8Q8IWU4 369 aa13.96□□□□□ -0.17
DDB2-216ENST00000622878 TMEM123Q8N131 208 aa13.96□□□□□ -0.17
DDB2-216ENST00000622878 SCAIQ8N9R8 606 aa13.96□□□□□ -0.17
DDB2-216ENST00000622878 MAGEE2Q8TD90 523 aaPredicted RBP13.96□□□□□ -0.17
DDB2-216ENST00000622878 MOGAT1Q96PD6 335 aa13.96□□□□□ -0.17
DDB2-216ENST00000622878 ZNF317Q96PQ6 595 aaPredicted RBP13.96□□□□□ -0.17
DDB2-216ENST00000622878 OR2M2Q96R28 347 aa13.96□□□□□ -0.17
DDB2-216ENST00000622878 MCHR1Q99705 422 aa13.96□□□□□ -0.17
DDB2-216ENST00000622878 ALG2Q9H553 416 aa13.96□□□□□ -0.17
DDB2-216ENST00000622878 SAR1AQ9NR31 198 aa13.96□□□□□ -0.17
DDB2-216ENST00000622878 CRNNQ9UBG3 495 aaPredicted RBP13.96□□□□□ -0.17
DDB2-216ENST00000622878 GDF2Q9UK05 429 aaPredicted RBP13.96□□□□□ -0.17
DDB2-216ENST00000622878 CORINQ9Y5Q5 1042 aa13.96□□□□□ -0.17
DDB2-216ENST00000622878 CR1P17927 2039 aa13.96□□□□□ -0.17
DDB2-216ENST00000622878 ARPC4-TTLL3A0A0A6YYG9 625 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 LRRN3E7EW58 273 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 KRT33AO76009 404 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 WNT11O96014 354 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 TROVE2P10155 538 aaKnown RBP eCLIP13.95□□□□□ -0.18
DDB2-216ENST00000622878 HLA-DOBP13765 273 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 CBLP22681 906 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 ACVR1BP36896 505 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 ARFIP2P53365 341 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 ROR2Q01974 943 aaKnown RBP13.95□□□□□ -0.18
DDB2-216ENST00000622878 KLF10Q13118 480 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 VMACQ2NL98 169 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 RABL3Q5HYI8 236 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 ZNF544Q6NX49 715 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 WDR88Q6ZMY6 472 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 WDFY1Q8IWB7 410 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 MUC15Q8N387 334 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 LRRC58Q96CX6 371 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 ZNF837Q96EG3 531 aaPredicted RBP13.95□□□□□ -0.18
DDB2-216ENST00000622878 EPYCQ99645 322 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 PCDHAC1Q9H158 963 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 CCDC134Q9H6E4 229 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 CBLN4Q9NTU7 201 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 MRGBPQ9NV56 204 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 MRPL39Q9NYK5 338 aaKnown RBP13.95□□□□□ -0.18
DDB2-216ENST00000622878 SELENONQ9NZV5 590 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 ARFGEF3Q5TH69 2177 aa13.95□□□□□ -0.18
DDB2-216ENST00000622878 IGHV1-18A0A0C4DH31 117 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 CHP2O43745 196 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 SLC43A1O75387 559 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 NPPAP01160 153 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 HOXB1P14653 301 aaPredicted RBP13.94□□□□□ -0.18
DDB2-216ENST00000622878 PAX7P23759 505 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 FABP6P51161 128 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 SH3BGRP55822 239 aaPredicted RBP13.94□□□□□ -0.18
DDB2-216ENST00000622878 KRTAP1-1Q07627 177 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 C1DQ13901 141 aaKnown RBP13.94□□□□□ -0.18
DDB2-216ENST00000622878 CYLC2Q14093 348 aaPredicted RBP13.94□□□□□ -0.18
DDB2-216ENST00000622878 C3orf36Q3SXR2 165 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 ENTPD8Q5MY95 495 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 PHYHD1Q5SRE7 291 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 INTS11Q5TA45 600 aaKnown RBP13.94□□□□□ -0.18
DDB2-216ENST00000622878 ANKRD16Q6P6B7 361 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 KLHL24Q6TFL4 600 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 DEPDC4Q8N2C3 294 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 OR8J3Q8NGG0 315 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 RNF217Q8TC41 542 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 ZNF426Q9BUY5 554 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 FKRPQ9H9S5 495 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 GPR35Q9HC97 309 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 POU2F3Q9UKI9 436 aa13.94□□□□□ -0.18
DDB2-216ENST00000622878 SONP18583 2426 aaKnown RBP13.94□□□□□ -0.18
DDB2-216ENST00000622878 ABCA2Q9BZC7 2435 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 DNHD1Q96M86 4753 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 A0A096LPE4 126 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 A0A1W2PPZ6 126 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 ATP6V1G2-DDX39BF2Z307 99 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 PLPP3O14495 311 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 IGLV1-44P01699 117 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 ARF1P84077 181 aaKnown RBP13.93□□□□□ -0.18
DDB2-216ENST00000622878 GUCY1A3Q02108 690 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 REP15Q6BDI9 236 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 HMBOX1Q6NT76 420 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 FBXL14Q8N1E6 418 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 FAM169BQ8N8A8 192 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 PIK3C3Q8NEB9 887 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 ADAMTS16Q8TE57 1224 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 ZNF583Q96ND8 569 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 SLC38A2Q96QD8 506 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 SH3GL1Q99961 368 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 CACNG6Q9BXT2 260 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 BARX1Q9HBU1 254 aaPredicted RBP13.93□□□□□ -0.18
DDB2-216ENST00000622878 CRLF2Q9HC73 371 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 MOKQ9UQ07 419 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 ATP23Q9Y6H3 246 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 ABCA1O95477 2261 aa13.93□□□□□ -0.18
DDB2-216ENST00000622878 ZNF503-AS2A6NEH8 195 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 CPSF4LA6NMK7 179 aaKnown RBP13.92□□□□□ -0.18
DDB2-216ENST00000622878 BBIP1A8MTZ0 92 aa13.92□□□□□ -0.18
DDB2-216ENST00000622878 RNF223E7ERA6 249 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms