RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 STMN2Q93045 179 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 RPUSD4Q96CM3 377 aaKnown RBP3.45□□□□□ -1.86
CPNE3-213ENST00000622183 TMEM101Q96IK0 257 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 NAP1L5Q96NT1 182 aaPredicted RBP3.45□□□□□ -1.86
CPNE3-213ENST00000622183 SORT1Q99523 831 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 TMEM246Q9BRR3 403 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 PELOQ9BRX2 385 aaKnown RBP3.45□□□□□ -1.86
CPNE3-213ENST00000622183 RIOK2Q9BVS4 552 aaKnown RBP3.45□□□□□ -1.86
CPNE3-213ENST00000622183 PLSCR3Q9NRY6 295 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 PLEKHG1Q9ULL1 1385 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 CDHR2Q9BYE9 1310 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.44□□□□□ -1.86
CPNE3-213ENST00000622183 RBMY1BA6NDE4 496 aaKnown RBP3.44□□□□□ -1.86
CPNE3-213ENST00000622183 RBMY1EA6NEQ0 496 aaKnown RBP3.44□□□□□ -1.86
CPNE3-213ENST00000622183 EMC8O43402 210 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 SUPT7LO94864 414 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 IGHV2-5P01817 119 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 C2P06681 752 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 RBMY1DP0C7P1 496 aaKnown RBP3.44□□□□□ -1.86
CPNE3-213ENST00000622183 PABPC4LP0CB38 370 aaKnown RBP3.44□□□□□ -1.86
CPNE3-213ENST00000622183 RBMY1A1P0DJD3 496 aaKnown RBP3.44□□□□□ -1.86
CPNE3-213ENST00000622183 ABOP16442 354 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 ZNF43P17038 809 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 FBXW4P57775 412 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 GPNMBQ14956 572 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 RCN1Q15293 331 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 TGFBIQ15582 683 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 GPR157Q5UAW9 335 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 PRAMEF20Q5VT98 475 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 RAET1LQ5VY80 246 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 LRRC66Q68CR7 880 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 TRIM40Q6P9F5 258 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 ZNF620Q6ZNG0 422 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 C19orf35Q6ZS72 473 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 PRR22Q8IZ63 422 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 PNKDQ8N490 385 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 OR52K2Q8NGK3 314 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 PLPPR1Q8TBJ4 325 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 GPR151Q8TDV0 419 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 DCUN1D4Q92564 292 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 ARPC1AQ92747 370 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 FCRL1Q96LA6 429 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 SH3GL1Q99961 368 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 FAM192AQ9GZU8 254 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 MRPL47Q9HD33 250 aaKnown RBP3.44□□□□□ -1.86
CPNE3-213ENST00000622183 RAB20Q9NX57 234 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 IL17CQ9P0M4 197 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 NUP50Q9UKX7 468 aa3.44□□□□□ -1.86
CPNE3-213ENST00000622183 C12orf71A8MTZ7 269 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 A8MUA0 341 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 TCP11X1B4DZS4 312 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 C12orf77C9JDV5 145 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 KRTAP4-16G5E9R7 235 aaPredicted RBP3.43□□□□□ -1.86
CPNE3-213ENST00000622183 CCL21O00585 134 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 GOSR2O14653 212 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 SOX15O60248 233 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 ERLIN2O94905 339 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 KRT14P02533 472 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 HPNP05981 417 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 TCN1P20061 433 aaPredicted RBP3.43□□□□□ -1.86
CPNE3-213ENST00000622183 SLC2A5P22732 501 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 PRDX3P30048 256 aaKnown RBP3.43□□□□□ -1.86
CPNE3-213ENST00000622183 FMO3P31513 532 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 RBMXP38159 391 aaKnown RBP3.43□□□□□ -1.86
CPNE3-213ENST00000622183 CAV2P51636 162 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 ACLYP53396 1101 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 PRPS1P60891 318 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 LYZP61626 148 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 NDPQ00604 133 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 TGM3Q08188 693 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 HERPUD1Q15011 391 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 CYTH1Q15438 398 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 ZNF79Q15937 498 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 IL17AQ16552 155 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 NRF1Q16656 503 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 VPS26BQ4G0F5 336 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 RNF165Q6ZSG1 346 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 GTPBP8Q8N3Z3 284 aaPredicted RBP3.43□□□□□ -1.86
CPNE3-213ENST00000622183 B3GNT7Q8NFL0 401 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 HSFY1Q96LI6 401 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 IMMP1LQ96LU5 166 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 CENPKQ9BS16 269 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 ADAP2Q9NPF8 381 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 INPP5EQ9NRR6 644 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 GLRX2Q9NS18 164 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 EXD2Q9NVH0 621 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 CALYQ9NYX4 217 aa3.43□□□□□ -1.86
CPNE3-213ENST00000622183 ZNF318Q5VUA4 2279 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 A0A075B6Q4 140 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 OR2AG2A6NM03 316 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 C9JVG2 144 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 KRTAP1-4P0C5Y4 121 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 CHTF8P0CG12 524 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 SFTPCP11686 197 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 ICAM2P13598 275 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 FUT3P21217 361 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 HTR1EP28566 365 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 CD1BP29016 333 aa3.42□□□□□ -1.86
CPNE3-213ENST00000622183 ATP5C1P36542 298 aaKnown RBP3.42□□□□□ -1.86
CPNE3-213ENST00000622183 NPBWR2P48146 333 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms