RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 UBE2J2Q8N2K1 259 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 LIPHQ8WWY8 451 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 RSRC1Q96IZ7 334 aaKnown RBP16.46■□□□□ 0.23
CIRBP-245ENST00000621399 ALPK1Q96QP1 1244 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 TAS2R5Q9NYW4 299 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 PRSS50Q9UI38 385 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 TMCC3Q9ULS5 477 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 NOX1Q9Y5S8 564 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 INTS1Q8N201 2190 aaKnown RBP16.45■□□□□ 0.22
CIRBP-245ENST00000621399 C11orf98E9PRG8 122 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 TNFRSF11BO00300 401 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 RNF13O43567 381 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 SERPINI2O75830 405 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 IGHV3-9P01782 118 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 HLA-DOBP13765 273 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 EDNRAP25101 427 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 CD79BP40259 229 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 CLDN17P56750 224 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 POU3F1Q03052 451 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-245ENST00000621399 ZP4Q12836 540 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 MEX3BQ6ZN04 569 aaKnown RBP16.45■□□□□ 0.22
CIRBP-245ENST00000621399 PXKQ7Z7A4 578 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 OR4K5Q8NGD3 323 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 UTP4Q969X6 686 aaKnown RBP16.45■□□□□ 0.22
CIRBP-245ENST00000621399 FUZQ9BT04 418 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 KRCC1Q9NPI7 259 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-245ENST00000621399 TMEM5Q9Y2B1 443 aa16.45■□□□□ 0.22
CIRBP-245ENST00000621399 SH3PXD2BA1X283 911 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 GPR4P46093 362 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 GABPB1Q06547 395 aaPredicted RBP16.44■□□□□ 0.22
CIRBP-245ENST00000621399 SNTB1Q13884 538 aaKnown RBP16.44■□□□□ 0.22
CIRBP-245ENST00000621399 FBXW9Q5XUX1 488 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 OR2T5Q6IEZ7 315 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 NIPAL3Q6P499 406 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 TMPRSS11FQ6ZWK6 438 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 YTHDF3Q7Z739 585 aaKnown RBP16.44■□□□□ 0.22
CIRBP-245ENST00000621399 OAFQ86UD1 273 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 ANKK1Q8NFD2 765 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 OR2T29Q8NH02 315 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 FAM46AQ96IP4 442 aaKnown RBP16.44■□□□□ 0.22
CIRBP-245ENST00000621399 ENKD1Q9H0I2 346 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 YY1AP1Q9H869 796 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 REEP1Q9H902 201 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 ICE1Q9Y2F5 2266 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 MPDZO75970 2070 aa16.44■□□□□ 0.22
CIRBP-245ENST00000621399 C16orf97H3BN30 126 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 TRAF3IP2O43734 574 aaPredicted RBP16.43■□□□□ 0.22
CIRBP-245ENST00000621399 AKAP8O43823 692 aaKnown RBP16.43■□□□□ 0.22
CIRBP-245ENST00000621399 OR10H3O60404 316 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 CNOT4O95628 575 aaKnown RBP16.43■□□□□ 0.22
CIRBP-245ENST00000621399 ADAP00813 363 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 CST1P01037 141 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 COX6B1P14854 86 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 IGFBP2P18065 325 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 PEX19P40855 299 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 AQP2P41181 271 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 SELENOPP49908 381 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 HMGA2P52926 109 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 SORDQ00796 357 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 RPL18Q07020 188 aaKnown RBP16.43■□□□□ 0.22
CIRBP-245ENST00000621399 LAPTM4AQ15012 233 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 Q6ZT83 130 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 GABRG1Q8N1C3 465 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 OR51A7Q8NH64 312 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 TXNDC15Q96J42 360 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 SPOCK3Q9BQ16 436 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 CCM2LQ9NUG4 571 aaPredicted RBP16.43■□□□□ 0.22
CIRBP-245ENST00000621399 UPB1Q9UBR1 384 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 RCE1Q9Y256 329 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 LYVE1Q9Y5Y7 322 aa16.43■□□□□ 0.22
CIRBP-245ENST00000621399 ADGRG4Q8IZF6 3080 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 GNGT2O14610 69 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 FKBP6O75344 327 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 KRT33AO76009 404 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 UGT2B10P36537 528 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 IFNGR2P38484 337 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 OMPP47874 163 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 LIMS1P48059 325 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 SLC9A3P48764 834 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 PCYT1AP49585 367 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 FAPQ12884 760 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 CCNIQ14094 377 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 P2RY6Q15077 328 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 TSPO2Q5TGU0 170 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 HIST2H2BCQ6DN03 193 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 STAC2Q6ZMT1 411 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 CXorf67Q86X51 503 aaPredicted RBP16.42■□□□□ 0.22
CIRBP-245ENST00000621399 DMRTC2Q8IXT2 367 aaPredicted RBP16.42■□□□□ 0.22
CIRBP-245ENST00000621399 PAPD5Q8NDF8 572 aaKnown RBP16.42■□□□□ 0.22
CIRBP-245ENST00000621399 OR13C2Q8NGS9 318 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 MOSPD2Q8NHP6 518 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 SLCO4A1Q96BD0 722 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 TNFRSF13CQ96RJ3 184 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 EMC6Q9BV81 110 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 SLCO5A1Q9H2Y9 848 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 SLC7A10Q9NS82 523 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 ASB6Q9NWX5 421 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 MED29Q9NX70 200 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 HIF3AQ9Y2N7 669 aa16.42■□□□□ 0.22
CIRBP-245ENST00000621399 SAMHD1Q9Y3Z3 626 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms