RNA–Protein interactions for RNA: ENST00000620759.1

CDKN3-212, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-212ENST00000620759 GINS1Q14691 196 aa0.73□□□□□ -2.29
CDKN3-212ENST00000620759 FAM133BQ5BKY9 247 aaKnown RBP0.73□□□□□ -2.29
CDKN3-212ENST00000620759 KDM7AQ6ZMT4 941 aa0.73□□□□□ -2.29
CDKN3-212ENST00000620759 CENPUQ71F23 418 aa0.73□□□□□ -2.29
CDKN3-212ENST00000620759 STRADAQ7RTN6 431 aa0.73□□□□□ -2.29
CDKN3-212ENST00000620759 THOC6Q86W42 341 aaKnown RBP0.73□□□□□ -2.29
CDKN3-212ENST00000620759 GRAMD2AQ8IUY3 354 aa0.73□□□□□ -2.29
CDKN3-212ENST00000620759 APCDD1LQ8NCL9 501 aa0.73□□□□□ -2.29
CDKN3-212ENST00000620759 IPMKQ8NFU5 416 aa0.73□□□□□ -2.29
CDKN3-212ENST00000620759 OR2L3Q8NG85 312 aa0.73□□□□□ -2.29
CDKN3-212ENST00000620759 PTP4A1Q93096 173 aa0.73□□□□□ -2.29
CDKN3-212ENST00000620759 CREB3L1Q96BA8 519 aa0.73□□□□□ -2.29
CDKN3-212ENST00000620759 SHANK2-AS3Q9BTD1 123 aa0.73□□□□□ -2.29
CDKN3-212ENST00000620759 DHX33Q9H6R0 707 aaKnown RBP0.73□□□□□ -2.29
CDKN3-212ENST00000620759 RNF167Q9H6Y7 350 aa0.73□□□□□ -2.29
CDKN3-212ENST00000620759 YY1AP1Q9H869 796 aa0.73□□□□□ -2.29
CDKN3-212ENST00000620759 KMT2BQ9UMN6 2715 aaPredicted RBP0.73□□□□□ -2.29
CDKN3-212ENST00000620759 CENPJQ9HC77 1338 aaPredicted RBP0.72□□□□□ -2.29
CDKN3-212ENST00000620759 IGHV3-74A0A0B4J1X5 117 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 ZNF98A6NK75 572 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 G3V4G9 280 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 RS1O15537 224 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 FMO6PO60774 539 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 CA1P00915 261 aaPredicted RBP0.72□□□□□ -2.29
CDKN3-212ENST00000620759 IGHDP01880 384 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 H2BFMP0C1H6 154 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 FOLR1P15328 257 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 COX5AP20674 150 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 TBXA2RP21731 343 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 PKNOX1P55347 436 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 ZNF235Q14590 738 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 CCDC40Q4G0X9 1142 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 AP1ARQ63HQ0 302 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 WDR88Q6ZMY6 472 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 ZNF546Q86UE3 836 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 CBWD2Q8IUF1 395 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 CNTN4Q8IWV2 1026 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 RNF148Q8N7C7 305 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 OR10A7Q8NGE5 316 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 OR5L2Q8NGL0 311 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 LINC01560Q8TB33 94 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 ZSCAN5AQ9BUG6 496 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 GSDMCQ9BYG8 508 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 FBXO6Q9NRD1 293 aaPredicted RBP0.72□□□□□ -2.29
CDKN3-212ENST00000620759 XCL2Q9UBD3 114 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 SEC14L3Q9UDX4 400 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 RPL36Q9Y3U8 105 aaKnown RBP0.72□□□□□ -2.29
CDKN3-212ENST00000620759 CUX2O14529 1486 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 TNS2Q63HR2 1409 aa0.72□□□□□ -2.29
CDKN3-212ENST00000620759 CARMIL1Q5VZK9 1371 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 FRMPD3Q5JV73 1810 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 FANCIQ9NVI1 1328 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 TET2Q6N021 2002 aaPredicted RBP0.71□□□□□ -2.3
CDKN3-212ENST00000620759 DDX39AO00148 427 aaKnown RBP0.71□□□□□ -2.3
CDKN3-212ENST00000620759 GABARAPO95166 117 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 CD74P04233 296 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 POLR2EP19388 210 aaKnown RBP0.71□□□□□ -2.3
CDKN3-212ENST00000620759 NPR2P20594 1047 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 PTGFRP43088 359 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 CXCL12P48061 93 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 GDI2P50395 445 aaKnown RBP0.71□□□□□ -2.3
CDKN3-212ENST00000620759 GABPB1Q06547 395 aaPredicted RBP0.71□□□□□ -2.3
CDKN3-212ENST00000620759 LINC01620Q4KN68 170 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 ETFRF1Q6IPR1 90 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 ZFP1Q6P2D0 407 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 CCDC170Q8IYT3 715 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 MREGQ8N565 214 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 VN1R2Q8NFZ6 395 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 GEMIN6Q8WXD5 167 aaKnown RBP0.71□□□□□ -2.3
CDKN3-212ENST00000620759 SNX21Q969T3 373 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 NSMCE2Q96MF7 247 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 MRPL45Q9BRJ2 306 aaKnown RBP0.71□□□□□ -2.3
CDKN3-212ENST00000620759 NXF5Q9H1B4 397 aaKnown RBP0.71□□□□□ -2.3
CDKN3-212ENST00000620759 ISYNA1Q9NPH2 558 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 AGPAT5Q9NUQ2 364 aa0.71□□□□□ -2.3
CDKN3-212ENST00000620759 STRAPQ9Y3F4 350 aaKnown RBP0.71□□□□□ -2.3
CDKN3-212ENST00000620759 ABCC4O15439 1325 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 CIB4A0PJX0 185 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 RASGRF2O14827 1237 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 TAPBPO15533 448 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 TBX19O60806 448 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 RHOBTB1O94844 696 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 CA3P07451 260 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 HMOX1P09601 288 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 TPSB2P20231 275 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 PSMA2P25787 234 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 CSNK1A1P48729 337 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 AP3M2P53677 418 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 TNFRSF17Q02223 184 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 ACVR1Q04771 509 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 IFT88Q13099 833 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 TPSAB1Q15661 275 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 SMUG1Q53HV7 270 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 CASP12Q6UXS9 341 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 CALHM1Q8IU99 346 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 MINDY2Q8NBR6 621 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 FAM71CQ8NEG0 241 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 OR5M1Q8NGP8 315 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 OR13G1Q8NGZ3 307 aa0.7□□□□□ -2.3
CDKN3-212ENST00000620759 URGCPQ8TCY9 931 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms