RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 SYT4Q9H2B2 425 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 KCNN3Q9UGI6 736 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 SLC7A11Q9UPY5 501 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 A0A1W2PQL4 384 aaPredicted RBP12.74□□□□□ -0.37
CIITA-213ENST00000618327 VSTM5A8MXK1 200 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 CREBL2O60519 120 aaPredicted RBP12.74□□□□□ -0.37
CIITA-213ENST00000618327 MT-ATP6P00846 226 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 DLSTP36957 453 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 RBMXP38159 391 aaKnown RBP12.74□□□□□ -0.37
CIITA-213ENST00000618327 ZNF628Q5EBL2 1059 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 ZNF620Q6ZNG0 422 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 SSX6Q7RTT6 188 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 DTX3Q8N9I9 347 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 OR13F1Q8NGS4 319 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 SPTSSAQ969W0 71 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 GIMAP5Q96F15 307 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 ZNF764Q96H86 408 aaPredicted RBP12.74□□□□□ -0.37
CIITA-213ENST00000618327 THOC3Q96J01 351 aaKnown RBP12.74□□□□□ -0.37
CIITA-213ENST00000618327 SMOC1Q9H4F8 434 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 CCDC86Q9H6F5 360 aaKnown RBP12.74□□□□□ -0.37
CIITA-213ENST00000618327 NKX2-2O95096 273 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 PET100P0DJ07 73 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 GTF2F2P13984 249 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 EVI2BP34910 448 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 RNF4P78317 190 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 ARSKQ6UWY0 536 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 SLC22A18ASQ8N1D0 253 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 PIGQQ9BRB3 760 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 ATG5Q9H1Y0 275 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 PLEK2Q9NYT0 353 aa12.74□□□□□ -0.37
CIITA-213ENST00000618327 ARRDC5A6NEK1 342 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 F5H5K5 113 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 OR2T7P0C7T2 308 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 STARD6P59095 220 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 UBE2NP61088 152 aaKnown RBP12.73□□□□□ -0.37
CIITA-213ENST00000618327 SPIN3Q5JUX0 258 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 MRM1Q6IN84 353 aaKnown RBP12.73□□□□□ -0.37
CIITA-213ENST00000618327 SFTPA2Q8IWL1 248 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 OR2T27Q8NH04 317 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 HOXB13Q92826 284 aaPredicted RBP12.73□□□□□ -0.37
CIITA-213ENST00000618327 NUDT9Q9BW91 350 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 ULBP2Q9BZM5 246 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 WWTR1Q9GZV5 400 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 FN3KQ9H479 309 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 SIRT3Q9NTG7 399 aaPredicted RBP12.73□□□□□ -0.37
CIITA-213ENST00000618327 BORCS7-ASMTA0A0B4J1R7 106 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 A0A1B0GTQ1 180 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 CDHR4A6H8M9 788 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 ZAR1LA6NP61 321 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 WDPCPO95876 746 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 FUCA1P04066 466 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 PEBP1P30086 187 aaKnown RBP12.73□□□□□ -0.37
CIITA-213ENST00000618327 IL11RAQ14626 422 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 TMEM201Q5SNT2 666 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 ACSM5Q6NUN0 579 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 KCTD20Q7Z5Y7 419 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 OR4D9Q8NGE8 314 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 RPL3LQ92901 407 aaKnown RBP12.73□□□□□ -0.37
CIITA-213ENST00000618327 ZNF566Q969W8 418 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 Q96M85 177 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 ZPBPQ9BS86 351 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 VN1R1Q9GZP7 353 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 RGCCQ9H4X1 137 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 HOXD12P35452 270 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 OPRL1P41146 370 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 APOBEC1P41238 236 aaKnown RBP12.73□□□□□ -0.37
CIITA-213ENST00000618327 EMDP50402 254 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 MALLQ13021 153 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 PRICKLE4Q2TBC4 344 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 CTU2Q2VPK5 515 aaKnown RBP12.73□□□□□ -0.37
CIITA-213ENST00000618327 SYT14P1Q58G82 188 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 OR1N1Q8NGS0 311 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 DEDD2Q8WXF8 326 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 TMEM72A0PK05 275 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 GLP1RP43220 463 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 ADPRMQ3LIE5 342 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 OR52I1Q8NGK6 324 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 ASB17Q8WXJ9 295 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 RASD2Q96D21 266 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 CHRNA9Q9UGM1 479 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 POLHQ9Y253 713 aa12.73□□□□□ -0.37
CIITA-213ENST00000618327 UNC13CQ8NB66 2214 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 MEGF11A6BM72 1044 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 OR2J2O76002 312 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 FTMTQ8N4E7 242 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 ZNF417Q8TAU3 575 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 ELP5Q8TE02 316 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 FCRL1Q96LA6 429 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 OR5M11Q96RB7 305 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 UCK1Q9HA47 277 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 ELOVL3Q9HB03 270 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 COQ3Q9NZJ6 369 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 AK6Q9Y3D8 172 aaKnown RBP12.72□□□□□ -0.37
CIITA-213ENST00000618327 TNFSF15O95150 251 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 AGTR1P30556 359 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 UQCRC1P31930 480 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 CLDN17P56750 224 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 SLC35A2P78381 396 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 CAMK2DQ13557 499 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 MELKQ14680 651 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms