RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 TIMM29Q9BSF4 260 aa5.59□□□□□ -1.51
RFX3-212ENST00000617270 XYLT2Q9H1B5 865 aa5.59□□□□□ -1.51
RFX3-212ENST00000617270 GAR1Q9NY12 217 aaKnown RBP5.59□□□□□ -1.51
RFX3-212ENST00000617270 SIX4Q9UIU6 781 aa5.59□□□□□ -1.51
RFX3-212ENST00000617270 BOKQ9UMX3 212 aaPredicted RBP5.59□□□□□ -1.51
RFX3-212ENST00000617270 EMC9Q9Y3B6 208 aa5.59□□□□□ -1.51
RFX3-212ENST00000617270 SUSD5O60279 629 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 STC2O76061 302 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 FABP1P07148 127 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 ADH4P08319 380 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 PVRP15151 417 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 EMX1Q04741 257 aaPredicted RBP5.59□□□□□ -1.52
RFX3-212ENST00000617270 MLF2Q15773 248 aaPredicted RBP5.59□□□□□ -1.52
RFX3-212ENST00000617270 ZNF239Q16600 458 aaKnown RBP5.59□□□□□ -1.52
RFX3-212ENST00000617270 GLYR1Q49A26 553 aaPredicted RBP5.59□□□□□ -1.52
RFX3-212ENST00000617270 MFSD12Q6NUT3 480 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 TMEM182Q6ZP80 229 aaPredicted RBP5.59□□□□□ -1.52
RFX3-212ENST00000617270 NRARPQ7Z6K4 114 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 SEMA6DQ8NFY4 1073 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 NEIL2Q969S2 332 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 TMEM106AQ96A25 262 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 ZNF251Q9BRH9 671 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 SYT17Q9BSW7 474 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 TMEM59LQ9UK28 342 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 ZNF840PA6NDX5 716 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 NME2P1O60361 137 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 TRAPPC2P0DI81 140 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 TRAPPC2BP0DI82 140 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 GABRB3P28472 473 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 CASP3P42574 277 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 AMTP48728 403 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 SUMO1P63165 101 aaKnown RBP5.59□□□□□ -1.52
RFX3-212ENST00000617270 PDZD3Q86UT5 571 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 LAX1Q8IWV1 398 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 ACOT4Q8N9L9 421 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 PIGTQ969N2 578 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 L3HYPDHQ96EM0 354 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 UQCC2Q9BRT2 126 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 ZMAT3Q9HA38 289 aaKnown RBP5.59□□□□□ -1.52
RFX3-212ENST00000617270 INPP5EQ9NRR6 644 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 OBP2AQ9NY56 170 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 CHRNA9Q9UGM1 479 aa5.59□□□□□ -1.52
RFX3-212ENST00000617270 SH2D7A6NKC9 451 aaPredicted RBP5.58□□□□□ -1.52
RFX3-212ENST00000617270 FABP7O15540 132 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 RAB40ALP0C0E4 278 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 CCR6P51684 374 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 HNRNPA3P51991 378 aaKnown RBP5.58□□□□□ -1.52
RFX3-212ENST00000617270 FOXA1P55317 472 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 ERVFC1P60507 584 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 HTR4Q13639 388 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 SNTB1Q13884 538 aaKnown RBP5.58□□□□□ -1.52
RFX3-212ENST00000617270 CPZQ66K79 652 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 Q6ZTK2 550 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 LINC00346Q8IVM7 164 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 KCNG3Q8TAE7 436 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 RAB40AQ8WXH6 277 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 BORCS6Q96GS4 357 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 KIRREL1Q96J84 757 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 ZNF778Q96MU6 729 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 RAB6CQ9H0N0 254 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 SRPK3Q9UPE1 567 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 NOSIPQ9Y314 301 aaKnown RBP5.58□□□□□ -1.52
RFX3-212ENST00000617270 MYH10P35580 1976 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 ANKUB1A6NFN9 424 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 P2RY10O00398 339 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 ABHD16AO95870 558 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 ACP2P11117 423 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 ZNF626Q68DY1 528 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 Q6ZRG5 221 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 AAED1Q7RTV5 226 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 H2BFWTQ7Z2G1 175 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 WDR5BQ86VZ2 330 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 OR2T11Q8NH01 316 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 TANKQ92844 425 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 ZNF586Q9NXT0 402 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 TAS2R5Q9NYW4 299 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 CLTCQ00610 1675 aaKnown RBP5.58□□□□□ -1.52
RFX3-212ENST00000617270 A0A1B0GVG6 124 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 TMEM72A0PK05 275 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 UGDHO60701 494 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 CPMP14384 443 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 PSMB1P20618 241 aaKnown RBP5.58□□□□□ -1.52
RFX3-212ENST00000617270 USF1P22415 310 aaPredicted RBP5.58□□□□□ -1.52
RFX3-212ENST00000617270 PSMB5P28074 263 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 OR1D4P47884 311 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 ETV1P50549 477 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 WDR5P61964 334 aaKnown RBP5.58□□□□□ -1.52
RFX3-212ENST00000617270 SMN1Q16637 294 aaKnown RBP5.58□□□□□ -1.52
RFX3-212ENST00000617270 HAGHQ16775 308 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 PRR27Q6MZM9 219 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 ADAM5Q6NVV9 412 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 LCTLQ6UWM7 567 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 LRRTM1Q86UE6 522 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 THNSL2Q86YJ6 484 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 APH1AQ96BI3 265 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 SLC12A9Q9BXP2 914 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 TMPRSS5Q9H3S3 457 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 POFUT1Q9H488 388 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 C12orf49Q9H741 205 aa5.58□□□□□ -1.52
RFX3-212ENST00000617270 AGPAT4Q9NRZ5 378 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms