RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 DDB2Q92466 427 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 RAX2Q96IS3 184 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 GABRG3Q99928 467 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 A0A1W2PS18 150 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 PLPP1O14494 284 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 NDUFA2O43678 99 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 PRKRAO75569 313 aaKnown RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 EVI2BP34910 448 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 NHLRC1Q6VVB1 395 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ZDHHC13Q8IUH4 622 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 LRRC15Q8TF66 581 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ZNF480Q8WV37 535 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SLC35A4Q96G79 324 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SNX18Q96RF0 628 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 DCLRE1BQ9H816 532 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 DNAJC18Q9H819 358 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 NKX1-2Q9UD57 310 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 ZDHHC8Q9ULC8 765 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 KLK5Q9Y337 293 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 LRRK1Q38SD2 2015 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 PMM2O15305 246 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ZNF821O75541 412 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 CST1P01037 141 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 HMGN1P05114 100 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 INSM1Q01101 510 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 MBTPS1Q14703 1052 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 RPE65Q16518 533 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ERI1Q8IV48 349 aaKnown RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 TMEM130Q8N3G9 435 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ADAT1Q9BUB4 502 aaKnown RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 MED26O95402 600 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 MT-ND1P03886 318 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 COL9A2Q14055 689 aaPredicted RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 IL18Q14116 193 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 SAMD8Q96LT4 415 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 MNTQ99583 582 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 SLC23A1Q9UHI7 598 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 RAP2CQ9Y3L5 183 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 SLC22A31A6NKX4 558 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 GLAP06280 429 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 SNU13P55769 128 aaKnown RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 CEBPEQ15744 281 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 BCL7AQ4VC05 210 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 DCAF10Q5QP82 559 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 ZNF362Q5T0B9 420 aaPredicted RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 ZNF704Q6ZNC4 412 aaPredicted RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 SLC35G3Q8N808 338 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 OR2V1Q8NHB1 315 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 SLCO5A1Q9H2Y9 848 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 A0A075B6Q4 140 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 EFSO43281 561 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 IFNA5P01569 189 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 OR1D4P47884 311 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 TRIM16LQ309B1 348 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 SIRPB2Q5JXA9 342 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 GCNT7Q6ZNI0 430 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 ABI3BPQ7Z7G0 1075 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 OR4A16Q8NH70 328 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 ENKURQ8TC29 256 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 RNF128Q8TEB7 428 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 DUSP9Q99956 384 aaKnown RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 INIPQ9NRY2 104 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 CMTM6Q9NX76 183 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 A0A0G2JN53 185 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 MRASO14807 208 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 IFI30P13284 250 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 ACER2Q5QJU3 275 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 C16orf87Q6PH81 154 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 ZNF627Q7L945 461 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 ANKRD46Q86W74 232 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 GALNT4Q8N4A0 578 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 PRR18Q8N4B5 295 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 SPATA22Q8NHS9 363 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 ST8SIA1Q92185 356 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 SEMA4CQ9C0C4 833 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 SPACA1Q9HBV2 294 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 CISD1Q9NZ45 108 aaKnown RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 EME2A4GXA9 379 aaPredicted RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 CHRNB1P11230 501 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 HOXD8P13378 290 aaPredicted RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 CDK2P24941 298 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 LMO1P25800 156 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 GNB1P62873 340 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 PRSS36Q5K4E3 855 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 SMARCD3Q6STE5 483 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 GRINAQ7Z429 371 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 HS3ST5Q8IZT8 346 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 LMO3Q8TAP4 145 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 BTBD2Q9BX70 525 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 TSPAN10Q9H1Z9 355 aaPredicted RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 A4GALTQ9NPC4 353 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 ABCD2Q9UBJ2 740 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 OSGIN1Q9UJX0 560 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 CPSF4LA6NMK7 179 aaKnown RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 MMP11P24347 488 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 EDNRAP25101 427 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 ACVR1BP36896 505 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 GNGT1P63211 74 aa3.07□□□□□ -1.92
LPP-220ENST00000617246 SRSF5Q13243 272 aaKnown RBP3.07□□□□□ -1.92
LPP-220ENST00000617246 CLEC12BQ2HXU8 276 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms