RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 UEVLDQ8IX04 471 aa13.59□□□□□ -0.23
SRGAP2C-205ENST00000617209 ZNF611Q8N823 705 aa13.59□□□□□ -0.23
SRGAP2C-205ENST00000617209 OR5J2Q8NH18 312 aa13.59□□□□□ -0.23
SRGAP2C-205ENST00000617209 HS6ST2Q96MM7 605 aa13.59□□□□□ -0.23
SRGAP2C-205ENST00000617209 CCT8L2Q96SF2 557 aa13.59□□□□□ -0.23
SRGAP2C-205ENST00000617209 FKRPQ9H9S5 495 aa13.59□□□□□ -0.23
SRGAP2C-205ENST00000617209 SPAG4Q9NPE6 437 aa13.59□□□□□ -0.23
SRGAP2C-205ENST00000617209 MEPEQ9NQ76 525 aaPredicted RBP13.59□□□□□ -0.23
SRGAP2C-205ENST00000617209 FAM53CQ9NYF3 392 aa13.59□□□□□ -0.23
SRGAP2C-205ENST00000617209 GMPR2Q9P2T1 348 aaKnown RBP13.59□□□□□ -0.23
SRGAP2C-205ENST00000617209 ZNF229Q9UJW7 825 aa13.59□□□□□ -0.23
SRGAP2C-205ENST00000617209 RNF115Q9Y4L5 304 aa13.59□□□□□ -0.23
SRGAP2C-205ENST00000617209 MED13LQ71F56 2210 aa13.59□□□□□ -0.23
SRGAP2C-205ENST00000617209 PLCE1Q9P212 2302 aa13.58□□□□□ -0.23
SRGAP2C-205ENST00000617209 ZNF587BE7ETH6 402 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 LRRN3E7EW58 273 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 GSTA4O15217 222 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 TMCC2O75069 709 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 SLC43A1O75387 559 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 KRT33AO76009 404 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 HPRP00739 348 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 PLAUP00749 431 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 MT-ND1P03886 318 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 CD3EP07766 207 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 HOXB1P14653 301 aaPredicted RBP13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 CBLP22681 906 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 TAS2R41P59536 307 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 BSPH1Q075Z2 132 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 PIN1Q13526 163 aaPredicted RBP13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 ALKBH2Q6NS38 261 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 C10orf53Q8N6V4 93 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 WDR31Q8NA23 367 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 PIK3C3Q8NEB9 887 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 LILRB1Q8NHL6 650 aaPredicted RBP13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 LIPHQ8WWY8 451 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 IGFBPL1Q8WX77 278 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 TPD52L3Q96J77 140 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 RADILQ96JH8 1075 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 LRR1Q96L50 414 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 OBP2BQ9NPH6 170 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 NANSQ9NR45 359 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 SLC17A5Q9NRA2 495 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 TAS2R5Q9NYW4 299 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 AMDHD2Q9Y303 409 aa13.58□□□□□ -0.24
SRGAP2C-205ENST00000617209 HS3ST1O14792 307 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 UPK3AO75631 287 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 FAM107AO95990 144 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 CH25HO95992 272 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 ASAH2BP0C7U1 165 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 PTAFRP25105 342 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 IFNA8P32881 189 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 SH3BGRP55822 239 aaPredicted RBP13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 ST3GAL3Q11203 375 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 FXNQ16595 210 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 KLHL17Q6TDP4 642 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 DEF8Q6ZN54 512 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 LINGO2Q7L985 606 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 NKAIN4Q8IVV8 208 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 TMEM123Q8N131 208 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 MAGEE2Q8TD90 523 aaPredicted RBP13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 OR2M2Q96R28 347 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 KCTD14Q9BQ13 255 aaPredicted RBP13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 UBTD1Q9HAC8 227 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 NPAP1Q9NZP6 1156 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 TAGLN3Q9UI15 199 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 A4GNTQ9UNA3 340 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 MGAT4BQ9UQ53 548 aa13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 MAGED1Q9Y5V3 778 aaPredicted RBP13.57□□□□□ -0.24
SRGAP2C-205ENST00000617209 SHOX2O60902 331 aaPredicted RBP13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 HIST1H2ABP04908 130 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 IFNW1P05000 195 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 ADORA3P0DMS8 318 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 HLA-DOBP13765 273 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 PTNP21246 168 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 MNAT1P51948 309 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 PRPS1P60891 318 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 SPATS1Q496A3 300 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 GKAP1Q5VSY0 366 aaPredicted RBP13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 C9orf135Q5VTT2 229 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 HMBOX1Q6NT76 420 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 TMEM108Q6UXF1 575 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 HIST3H2AQ7L7L0 130 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 VTCN1Q7Z7D3 282 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 LRRC75A-AS1Q8N1F1 130 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 OR1K1Q8NGR3 316 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 OR52N5Q8NH56 324 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 TMEM239Q8WW34 195 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 GEMIN6Q8WXD5 167 aaKnown RBP13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 AKAP1Q92667 903 aaKnown RBP eCLIP13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 BCL2L2Q92843 193 aaPredicted RBP13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 HIST1H2ACQ93077 130 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 PRRC1Q96M27 445 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 GORASP2Q9H8Y8 452 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 ARL8BQ9NVJ2 186 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 RPS6KA6Q9UK32 745 aa13.56□□□□□ -0.24
SRGAP2C-205ENST00000617209 SLC35F4A4IF30 521 aa13.55□□□□□ -0.24
SRGAP2C-205ENST00000617209 OR6A2O95222 327 aa13.55□□□□□ -0.24
SRGAP2C-205ENST00000617209 ZNF682O95780 498 aa13.55□□□□□ -0.24
SRGAP2C-205ENST00000617209 WNT11O96014 354 aa13.55□□□□□ -0.24
SRGAP2C-205ENST00000617209 SERPINA1P01009 418 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms