RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 PLPP7Q8NBV4 271 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 DUSP22Q9NRW4 184 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 SDK1Q7Z5N4 2213 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 IGHV5-51A0A0C4DH38 117 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 OR14I1A6ND48 311 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 GATBO75879 557 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 SULT1C4O75897 302 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 HTR3BO95264 441 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 POU3F2P20265 443 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 HTR3AP46098 478 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 DEFA5Q01523 94 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 HBMQ6B0K9 141 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 THAP6Q8TBB0 222 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 HOXB13Q92826 284 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 EMC6Q9BV81 110 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 CDCP1Q9H5V8 836 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 WDR76Q9H967 626 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 COA3Q9Y2R0 106 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 A0A0G2JMP0 313 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 A0A0X1KG70 313 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 NOTOA8MTQ0 251 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 I3L521 148 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 ZFAND5O76080 213 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 CFL1P23528 166 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 ZIC1Q15915 447 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 OR4M2Q8NGB6 313 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 NXF5Q9H1B4 397 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 RANBP3Q9H6Z4 567 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF346Q9UL40 294 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 NSG1A0A0A6YYJ2 146 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 IGHV3-15A0A0B4J1V0 119 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 HRKO00198 91 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 RP2O75695 350 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 CER1O95813 267 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 MPIG6BO95866 241 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 ALDOBP05062 364 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 OR2T7P0C7T2 308 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 RSU1Q15404 277 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 PRICKLE4Q2TBC4 344 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 PAPD4Q6PIY7 484 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 CORO6Q6QEF8 472 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 FAM26EQ8N5C1 309 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 OR2T27Q8NH04 317 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC41A2Q96JW4 573 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 SFXN2Q96NB2 322 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 GABRG3Q99928 467 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 HCAR1Q9BXC0 346 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 PLCXD1Q9NUJ7 323 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 CTSFQ9UBX1 484 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 TFP02787 698 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 THBS1P07996 1170 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 NPR2P20594 1047 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 SERPINA2P20848 420 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 MTNR1BP49286 362 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 HNRNPFP52597 415 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 C12orf73Q69YU5 71 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 TMEM205Q6UW68 189 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 KIRREL2Q6UWL6 708 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 CCDC74BQ96LY2 380 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 NEDD4LQ96PU5 975 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 BCL2L10Q9HD36 194 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 FAM60AQ9NP50 221 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 BOLA1Q9Y3E2 137 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 THSD7BQ9C0I4 1608 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 TRBV5-3A0A0A0MS03 114 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 ARRDC5A6NEK1 342 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 SRMP19623 302 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 CD34P28906 385 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 KIR2DL1P43626 348 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 CBX5P45973 191 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 DCAF7P61962 342 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 KCNJ8Q15842 424 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 BATF2Q8N1L9 274 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF321PQ8N8H1 164 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 PCNPQ8WW12 178 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF717Q9BY31 904 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 UBQLN2Q9UHD9 624 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 COL4A6Q14031 1691 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 XIRP2A4UGR9 3374 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 TRDV1A0A1B0GX56 115 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF850A8MQ14 1090 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 PRICKLE3O43900 615 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 CD79AP11912 226 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 IFNGR1P15260 489 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 SPI1P17947 270 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 CSNK1A1P48729 337 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 CCL7P80098 99 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 PRTGQ2VWP7 1150 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 TRIM61Q5EBN2 209 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 FAM27D1Q5T7N8 215 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 C1orf140Q5VVS0 124 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 METAP1DQ6UB28 335 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 VASH1Q7L8A9 365 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 SIAH3Q8IW03 269 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 OR2L13Q8N349 312 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF417Q8TAU3 575 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF578Q96N58 590 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 OR51J1Q9H342 316 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 NOX3Q9HBY0 568 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC25A19Q9HC21 320 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms