RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 HOXB2P14652 356 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 ATF1P18846 271 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 C5AR1P21730 350 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 HTR2CP28335 458 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 AKR1C2P52895 323 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 AKR1C1Q04828 323 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 LINC00303Q3SY05 128 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 TMEM244Q5VVB8 128 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 TRMT61AQ96FX7 289 aaKnown RBP13.51□□□□□ -0.25
VPS36-207ENST00000611132 ZNF629Q9UEG4 869 aaPredicted RBP13.51□□□□□ -0.25
VPS36-207ENST00000611132 CCL26Q9Y258 94 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 SCN4AP35499 1836 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 WNK3Q9BYP7 1800 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 RHPN2P1A8MT19 583 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 C1QCP02747 245 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 HNRNPA1P09651 372 aaKnown RBP eCLIP13.5□□□□□ -0.25
VPS36-207ENST00000611132 POU3F3P20264 500 aaPredicted RBP13.5□□□□□ -0.25
VPS36-207ENST00000611132 TSFMP43897 325 aaKnown RBP13.5□□□□□ -0.25
VPS36-207ENST00000611132 GLO1Q04760 184 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 OR10R2Q8NGX6 335 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 MS4A6EQ96DS6 147 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 ARL5BQ96KC2 179 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 SDF2Q99470 211 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 LSM5Q9Y4Y9 91 aaKnown RBP13.5□□□□□ -0.25
VPS36-207ENST00000611132 MYO9BQ13459 2157 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 K7ESM1 405 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 RBMXL2O75526 392 aaKnown RBP13.5□□□□□ -0.25
VPS36-207ENST00000611132 NR2C1P13056 603 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 CXCL3P19876 107 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 CRABP1P29762 137 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 MVDP53602 400 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 CDONQ4KMG0 1287 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 GLDNQ6ZMI3 551 aaPredicted RBP13.5□□□□□ -0.25
VPS36-207ENST00000611132 DGLUCYQ7Z3D6 616 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 TMEM200AQ86VY9 491 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 ANKRD53Q8N9V6 530 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 C12orf57Q99622 126 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 ZNF649Q9BS31 505 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 SAGE1Q9NXZ1 904 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 FBXO24O75426 580 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 RDH16O75452 317 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 GLCEO94923 617 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 SULT4A1Q9BR01 284 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 POFUT1Q9H488 388 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 PPP1R3EQ9H7J1 279 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 C2orf42Q9NWW7 574 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 RNF186Q9NXI6 227 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 PRELID3BQ9Y3B1 194 aa13.5□□□□□ -0.25
VPS36-207ENST00000611132 TSPAN11A1L157 253 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 SLC16A7O60669 478 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 UBL4AP11441 157 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 RAB6AP20340 208 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 LIPNQ5VXI9 398 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 TSACCQ96A04 125 aaPredicted RBP13.49□□□□□ -0.25
VPS36-207ENST00000611132 MIA3Q5JRA6 1907 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 SLC22A23A1A5C7 686 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 IL5P05113 134 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 PLCXD2Q0VAA5 305 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 PDZK1IP1Q13113 114 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 C14orf28Q4W4Y0 310 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 WBP2NLQ6ICG8 309 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 LCN10Q6JVE6 187 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 ASB17Q8WXJ9 295 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 RNF32Q9H0A6 362 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 ARID1AO14497 2285 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 LOC100289279A0A1B0GTE1 492 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 BDKRB2P30411 391 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 PPT1P50897 306 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 NDUFAF7Q7L592 441 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 TRAPPC6BQ86SZ2 158 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 ZNF565Q8N9K5 539 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 MCCC2Q9HCC0 563 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 A0A0A6YYH2 397 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 A6NJ64 397 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 TMEM200CA6NKL6 621 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 H3BUI4 141 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 SSX5O60225 188 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 MGMTP16455 207 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 ZNF28P17035 718 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 GXYLT1Q4G148 440 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 OR6N1Q8NGY5 312 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 PMM1Q92871 262 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 WDR76Q9H967 626 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 SMCO4Q9NRQ5 59 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 TM7SF3Q9NS93 570 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 CLDND1Q9NY35 253 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 ELF5Q9UKW6 265 aaPredicted RBP13.49□□□□□ -0.25
VPS36-207ENST00000611132 HIF3AQ9Y2N7 669 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 OR51B4Q9Y5P0 310 aa13.49□□□□□ -0.25
VPS36-207ENST00000611132 H7C1C5 153 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 LCN6P62502 163 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 DEFB110Q30KQ9 67 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 AADACL4Q5VUY2 407 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 ZNF679Q8IYX0 411 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 OR52B4Q8NGK2 314 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 LHFPL5Q8TAF8 219 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 FNDC9Q8TBE3 224 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 RASD2Q96D21 266 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 ZNF768Q9H5H4 540 aaKnown RBP13.48□□□□□ -0.25
VPS36-207ENST00000611132 ZMAT3Q9HA38 289 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms