RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TMED7-TICAM2A0A0A6YYA0 188 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 SUSD5O60279 629 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 ALOX12BO75342 701 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 ATP6V1G1O75348 118 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 BGLAPP02818 100 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 HOXA6P31267 233 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 ASAH1Q13510 395 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 OR2I1PQ8NGU4 316 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 SEMA4CQ9C0C4 833 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 SLC22A4Q9H015 551 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 C11orf54Q9H0W9 315 aaPredicted RBP12.35□□□□□ -0.43
NEK3-205ENST00000610828 MOKQ9UQ07 419 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 TMED7Q9Y3B3 224 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 C2orf72A6NCS6 295 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 TFECO14948 347 aaPredicted RBP12.35□□□□□ -0.43
NEK3-205ENST00000610828 ZNF354AO60765 605 aaPredicted RBP12.35□□□□□ -0.43
NEK3-205ENST00000610828 TXNDC12O95881 172 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 AHCYP23526 432 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 POLR2HP52434 150 aaKnown RBP12.35□□□□□ -0.43
NEK3-205ENST00000610828 FBXW4P57775 412 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 OR2B6P58173 313 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 HSF2Q03933 536 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 CCDC58Q4VC31 144 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 EMC4Q5J8M3 183 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 ZNF517Q6ZMY9 492 aaPredicted RBP12.35□□□□□ -0.43
NEK3-205ENST00000610828 MAMSTRQ6ZN01 415 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 PRR23CQ6ZRP0 262 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 EXD3Q8N9H8 876 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 C19orf18Q8NEA5 215 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 GPR119Q8TDV5 335 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 EDAQ92838 391 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 OR14A2Q96R54 314 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 APMAPQ9HDC9 416 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 TAS2R10Q9NYW0 307 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 TAS2R5Q9NYW4 299 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 EXTL2Q9UBQ6 330 aa12.35□□□□□ -0.43
NEK3-205ENST00000610828 TMEM72A0PK05 275 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 ARHGEF9O43307 516 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 PLGP00747 810 aaPredicted RBP12.34□□□□□ -0.43
NEK3-205ENST00000610828 RENP00797 406 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 RAB3BP20337 219 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 THBS2P35442 1172 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 SELENBP1Q13228 472 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 COL28A1Q2UY09 1125 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 SLC25A35Q3KQZ1 300 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 PHF19Q5T6S3 580 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 PAPD4Q6PIY7 484 aaKnown RBP12.34□□□□□ -0.43
NEK3-205ENST00000610828 PAMR1Q6UXH9 720 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 SLC16A9Q7RTY1 509 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 MAMDC2Q7Z304 686 aaPredicted RBP12.34□□□□□ -0.43
NEK3-205ENST00000610828 SYT9Q86SS6 491 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 WDR5BQ86VZ2 330 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 PPP1R3BQ86XI6 285 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 ADGRG3Q86Y34 549 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 OR6V1Q8N148 313 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 SAMD12Q8N8I0 201 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 NFAM1Q8NET5 270 aaPredicted RBP12.34□□□□□ -0.43
NEK3-205ENST00000610828 OR2T4Q8NH00 348 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 KCTD12Q96CX2 325 aaKnown RBP12.34□□□□□ -0.43
NEK3-205ENST00000610828 TTYH2Q9BSA4 534 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 PTDSS2Q9BVG9 487 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 SYT4Q9H2B2 425 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 B3GAT2Q9NPZ5 323 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 INIPQ9NRY2 104 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 ALPK2Q86TB3 2170 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 ADAMTS9Q9P2N4 1935 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 A0A0G2JK05 382 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 TVP23AA6NH52 213 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 PRR32B1ATL7 298 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 SEC14L5O43304 696 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 PAHP00439 452 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 EMP2P54851 167 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 RPS11P62280 158 aaKnown RBP eCLIP12.34□□□□□ -0.43
NEK3-205ENST00000610828 FAM69AQ5T7M9 428 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 GPR139Q6DWJ6 353 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 GRINAQ7Z429 371 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 LRRC28Q86X40 367 aaPredicted RBP12.34□□□□□ -0.43
NEK3-205ENST00000610828 DEFB123Q8N688 67 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 TEX19Q8NA77 164 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 CEP76Q8TAP6 659 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 OR11A1Q9GZK7 315 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 MMP28Q9H239 520 aa12.34□□□□□ -0.43
NEK3-205ENST00000610828 PAIP2BQ9ULR5 123 aaKnown RBP12.34□□□□□ -0.43
NEK3-205ENST00000610828 TRBV11-1A0A0K0K1C0 115 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 XKRYO14609 159 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 PLA2G10O15496 165 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 ARL6IP5O75915 188 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 RPP14O95059 124 aaKnown RBP12.33□□□□□ -0.44
NEK3-205ENST00000610828 MT-ATP6P00846 226 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 PRKCAP17252 672 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 PTBP1P26599 531 aaKnown RBP eCLIP12.33□□□□□ -0.448e-14■■■□□ 15
NEK3-205ENST00000610828 TALDO1P37837 337 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 CASP3P42574 277 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 SLC26A5P58743 744 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 EFR3AQ14156 821 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 C1orf140Q5VVS0 124 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 AGAP6Q5VW22 663 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 OVCH1Q7RTY7 1134 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 RAB43Q86YS6 212 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms