RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 PLK5Q496M5 336 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 LRRC37A5PQ49AS3 106 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 FAM205BPQ63HN1 556 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 RPL22L1Q6P5R6 122 aaKnown RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 UBE3DQ7Z6J8 389 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 IQCF2Q8IXL9 164 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 OR2L13Q8N349 312 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 OR6Q1Q8NGQ2 317 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 CCDC120Q96HB5 630 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 PDCD1LG2Q9BQ51 273 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 VN1R1Q9GZP7 353 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 RNF167Q9H6Y7 350 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 TXNL4BQ9NX01 149 aaKnown RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 GSKIPQ9P0R6 139 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 SATB2Q9UPW6 733 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 HSPB11Q9Y547 144 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 A0A1B0GVG6 124 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 HYAL3O43820 417 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 SEC14L2O76054 403 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 SBK2P0C263 348 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 CT62P0C5K7 136 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 CFL1P23528 166 aaKnown RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 CD40LGP29965 261 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 GABRA5P31644 462 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 RFC3P40938 356 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 FASLGP48023 281 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 MRPL19P49406 292 aaKnown RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 CARD18P57730 90 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 SLC22A6Q4U2R8 563 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 FAHD1Q6P587 224 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 GRAMD2AQ8IUY3 354 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 PIAS4Q8N2W9 510 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 FAM26EQ8N5C1 309 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 GDPD1Q8N9F7 314 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 MORN4Q8NDC4 146 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 BBS1Q8NFJ9 593 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 POTEKPQ9BYX7 375 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 DUSP21Q9H596 190 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 A4GNTQ9UNA3 340 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 GPR55Q9Y2T6 319 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF281Q9Y2X9 895 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 KLK4Q9Y5K2 254 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 BOLA2-SMG1P6H3BVE0 249 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 CRTAPO75718 401 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 TNFSF15O95150 251 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 HTR3BO95264 441 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 IL1AP01583 271 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF16P17020 682 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 EVI2BP34910 448 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 ETV5P41161 510 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 EIF1P41567 113 aaKnown RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 PTH2RP49190 550 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 ETV1P50549 477 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 PSMA6P60900 246 aaKnown RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 HERV-K104P61576 105 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 SLC35A1P78382 337 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 GPR50Q13585 617 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 MLC1Q15049 377 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 RSU1Q15404 277 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 NKPD1Q17RQ9 610 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 CHRFAM7AQ494W8 412 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 RNASE10Q5GAN6 216 aaKnown RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 C5orf46Q6UWT4 87 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 FAM57BQ71RH2 274 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 H1FNTQ75WM6 255 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 NDUFAF7Q7L592 441 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF565Q8N9K5 539 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 OR14A2Q96R54 314 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 GABARAPL3Q9BY60 117 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 S1PR5Q9H228 398 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 CALHM2Q9HA72 323 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 CDH20Q9HBT6 801 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 SIRT3Q9NTG7 399 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 TMEFF2Q9UIK5 374 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 MOKQ9UQ07 419 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 FAM230AA0A1W2PPH8 454 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 SERTM1A2A2V5 107 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 ARGFXA6NJG6 315 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 RAD51DO75771 328 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 SCGB1D2O95969 90 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 SLC2A1P11166 492 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 SNRPBP14678 240 aaKnown RBP6.66□□□□□ -1.34
CSDE1-218ENST00000610726 PRSS3P35030 304 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 RBM34P42696 430 aaKnown RBP6.66□□□□□ -1.34
CSDE1-218ENST00000610726 HNRNPFP52597 415 aaKnown RBP6.66□□□□□ -1.34
CSDE1-218ENST00000610726 SPEM2Q0P670 501 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 ZIC1Q15915 447 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 ACKR1Q16570 336 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 PYHIN1Q6K0P9 492 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 SLC16A14Q7RTX9 510 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 KCTD20Q7Z5Y7 419 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 TMEM99Q8N816 258 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 GAB3Q8WWW8 586 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 BORCS8Q96FH0 119 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 CCDC32Q9BV29 185 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF350Q9GZX5 532 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 GABARAPL1Q9H0R8 117 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 OR10A4Q9H209 315 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 C1orf198Q9H425 327 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 GALNT9Q9HCQ5 603 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms