RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 FABP7O15540 132 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 S100A11P31949 105 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 RAB35Q15286 201 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 ZNF684Q5T5D7 378 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 C15orf54Q8N8G6 183 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 SLC41A2Q96JW4 573 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 SLAMF8Q9P0V8 285 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 ENTPD2Q9Y5L3 495 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 DVL1O14640 695 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 ALDOCP09972 364 aaKnown RBP8.94□□□□□ -0.98
CSMD1-217ENST00000602723 OR8G3PP0DMU2 310 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 AOAHP28039 575 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 TACR3P29371 465 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 DVL1P1P54792 670 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-217ENST00000602723 SLC14A2Q15849 920 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 GLYR1Q49A26 553 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-217ENST00000602723 DPPA4Q7L190 304 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 VRK2Q86Y07 508 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 SLC43A2Q8N370 569 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 METTL9Q9H1A3 318 aa8.94□□□□□ -0.98
CSMD1-217ENST00000602723 TMEM72A0PK05 275 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 SLC9B1P1A6NJY1 282 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 TMEM217Q8N7C4 229 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 RPL3LQ92901 407 aaKnown RBP8.93□□□□□ -0.98
CSMD1-217ENST00000602723 KCNIP2Q9NS61 270 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 URGCP-MRPS24S4R325 110 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 OR52A4PA6NMU1 304 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 SLC43A1O75387 559 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 OR7C1O76099 320 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-217ENST00000602723 HPNP05981 417 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 DPP4P27487 766 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 FRMPD2BQ6IN97 320 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 CBLL1Q75N03 491 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 SLC35D2Q76EJ3 337 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 GPR26Q8NDV2 337 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 OR13F1Q8NGS4 319 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 WWTR1Q9GZV5 400 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 AADACP22760 399 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 PSMB3P49720 205 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 ACSM1Q08AH1 577 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 MOB3CQ70IA8 216 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 FAM122BQ7Z309 247 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 PRICKLE2Q7Z3G6 844 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 C1orf87Q8N0U7 546 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 CLDN22Q8N7P3 220 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 GHSRQ92847 366 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 PAAF1Q9BRP4 392 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 SUCNR1Q9BXA5 334 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 FBXL4Q9UKA2 621 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 ANGPTL7O43827 346 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 PTHP01270 115 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 IDUAP35475 653 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 SIRPAP78324 504 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 TMEM31Q5JXX7 168 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 B3GLCTQ6Y288 498 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 TMEM25Q86YD3 366 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 HEMK1Q9Y5R4 338 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-217ENST00000602723 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-217ENST00000602723 ZNF593O00488 134 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-217ENST00000602723 DFFBO76075 338 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 GASTP01350 101 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 THBS1P07996 1170 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 CLDN12P56749 244 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 CHRNEQ04844 493 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 TIGD3Q6B0B8 471 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 CBARPQ8N350 705 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-217ENST00000602723 KCNG3Q8TAE7 436 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 HSD17B8Q92506 261 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 RBPMSQ93062 196 aaKnown RBP8.93□□□□□ -0.98
CSMD1-217ENST00000602723 TMEM106AQ96A25 262 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 GPR160Q9UJ42 338 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 SUSD5O60279 629 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 OR2C1O95371 312 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 CTSL3PQ5NE16 218 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 SLC51BQ86UW2 128 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 SLC38A5Q8WUX1 472 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 A0A087WZY1 265 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 J3KTA2 159 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 OPN1LWP04000 364 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 OR2T7P0C7T2 308 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 CELF2-AS1Q8N7Q2 184 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 OR2T27Q8NH04 317 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 C11orf54Q9H0W9 315 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-217ENST00000602723 GAB2Q9UQC2 676 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 EMC9Q9Y3B6 208 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.93□□□□□ -0.98
CSMD1-217ENST00000602723 CACNA1HO95180 2353 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 LOC100289279A0A1B0GTE1 492 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 F6UZH7 168 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 ZDHHC11BP0C7U3 371 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 SNCAP37840 140 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 CATR1Q13166 79 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 SLC36A2Q495M3 483 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 MMP21Q8N119 569 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 ZNF566Q969W8 418 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 SLCO5A1Q9H2Y9 848 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 EXOSC3Q9NQT5 275 aaKnown RBP8.93□□□□□ -0.98
CSMD1-217ENST00000602723 UBQLN4Q9NRR5 601 aa8.93□□□□□ -0.98
CSMD1-217ENST00000602723 TRBV11-1A0A0K0K1C0 115 aa8.92□□□□□ -0.98
CSMD1-217ENST00000602723 AIFM1O95831 613 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms