RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 NCDNQ9UBB6 729 aa10.52□□□□□ -0.73
ARHGEF1-220ENST00000600274 CLDN16Q9Y5I7 305 aa10.52□□□□□ -0.73
ARHGEF1-220ENST00000600274 SHISA8B8ZZ34 492 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 DUX1O43812 170 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 ORC5O43913 435 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 OR7A10O76100 309 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 ALX3O95076 343 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 OR6A2O95222 327 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 MAS1P04201 325 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 HSD11B2P80365 405 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 SERTAD2Q14140 314 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 MELKQ14680 651 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 CLPPQ16740 277 aaPredicted RBP10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 LINGO2Q7L985 606 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 THAP7Q9BT49 309 aaPredicted RBP10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 RXFP3Q9NSD7 469 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 TRAPPC4Q9Y296 219 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 PSMD4P55036 377 aaKnown RBP10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 SLC37A1P57057 533 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 FAPQ12884 760 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 STK11Q15831 433 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 HSD17B12Q53GQ0 312 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 HBMQ6B0K9 141 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 WBP2NLQ6ICG8 309 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 CD200R1LQ6Q8B3 271 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 Q7L0L9 218 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 FAM220AQ7Z4H9 259 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 PM20D2Q8IYS1 436 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 GPR119Q8TDV5 335 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 ZNF431Q8TF32 576 aaPredicted RBP10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 LCORQ96JN0 433 aaPredicted RBP10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 LPAR4Q99677 370 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 FKRPQ9H9S5 495 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 CHRNA9Q9UGM1 479 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 POLHQ9Y253 713 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 EFCAB7A8K855 629 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 XKRYO14609 159 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 BCAT2O15382 392 aaPredicted RBP10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 PIAS2O75928 621 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 TFPIP10646 304 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 ACTC1P68032 377 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 ACTA1P68133 377 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 ZNF117Q03924 483 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 RPL18Q07020 188 aaKnown RBP10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 MAB21L1Q13394 359 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 SLC29A4Q7RTT9 530 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 RFT1Q96AA3 541 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 C8orf44Q96CB5 159 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 MAP6Q96JE9 813 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 ISYNA1Q9NPH2 558 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 EIF3KQ9UBQ5 218 aaKnown RBP10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 LAMP5Q9UJQ1 280 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 SERTAD3Q9UJW9 196 aa10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 MRPS17Q9Y2R5 130 aaKnown RBP10.51□□□□□ -0.73
ARHGEF1-220ENST00000600274 THADAQ6YHU6 1953 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 IGHV1OR21-1A0A087WYE8 117 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 A0A1W2PR77 199 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 H3BML4 177 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 ERVH48-1M5A8F1 160 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 FZD7O75084 574 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 PPM1BO75688 479 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 ATF1P18846 271 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 EIF1AXP47813 144 aaKnown RBP10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 OR3A3P47888 321 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 ZNF81P51508 661 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 FUT7Q11130 342 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 ZNF141Q15928 474 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 CHMP1BQ7LBR1 199 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 ZNF676Q8N7Q3 588 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 NPEPL1Q8NDH3 523 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 SETD6Q8TBK2 473 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 METTL21AQ8WXB1 218 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 TAAR8Q969N4 342 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 ABHD1Q96SE0 405 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 MED18Q9BUE0 208 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 WDR76Q9H967 626 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 POLE3Q9NRF9 147 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 NUDT15Q9NV35 164 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 MYEF2Q9P2K5 600 aaKnown RBP10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 GMEB2Q9UKD1 530 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 IGKV1D-42A0A075B6H8 117 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 SOX1O00570 391 aaPredicted RBP10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 CSF2RBP32927 897 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 MTNR1BP49286 362 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 FBXW4P57775 412 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 SNTA1Q13424 505 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 SMAD4Q13485 552 aaKnown RBP10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 ASAH1Q13510 395 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 EFR3AQ14156 821 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 BICRALQ6AI39 1079 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 PLXDC1Q8IUK5 500 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 LSMEM1Q8N8F7 131 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 LGALS14Q8TCE9 139 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 PRDM9Q9NQV7 894 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 KLHDC2Q9Y2U9 406 aa10.5□□□□□ -0.73
ARHGEF1-220ENST00000600274 A0A0B4J293 547 aa10.49□□□□□ -0.73
ARHGEF1-220ENST00000600274 EIF1AYO14602 144 aaKnown RBP10.49□□□□□ -0.73
ARHGEF1-220ENST00000600274 FABP7O15540 132 aa10.49□□□□□ -0.73
ARHGEF1-220ENST00000600274 CFIP05156 583 aa10.49□□□□□ -0.73
ARHGEF1-220ENST00000600274 SPARCP09486 303 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms