RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 CLK3P49761 638 aaKnown RBP12.15□□□□□ -0.46
IRF3-225ENST00000600022 TAS2R41P59536 307 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 IL1RL1Q01638 556 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 FGFBP1Q14512 234 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 CD226Q15762 336 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 MAPK14Q16539 360 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 CLEC12BQ2HXU8 276 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 FGD3Q5JSP0 725 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 HMGN2P46Q86SG4 172 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 CMIPQ8IY22 773 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 ZNF614Q8N883 585 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 OSTF1Q92882 214 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 DTNBP1Q96EV8 351 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 CNBD2Q96M20 576 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 PRRC1Q96M27 445 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 ZNF570Q96NI8 536 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 POLR2J2Q9GZM3 115 aaKnown RBP12.15□□□□□ -0.46
IRF3-225ENST00000600022 POLR2J3Q9H1A7 115 aaKnown RBP12.15□□□□□ -0.46
IRF3-225ENST00000600022 KRT84Q9NSB2 600 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 MED17Q9NVC6 651 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 LYVE1Q9Y5Y7 322 aa12.15□□□□□ -0.46
IRF3-225ENST00000600022 FREM1Q5H8C1 2179 aa12.15□□□□□ -0.47
IRF3-225ENST00000600022 ALPK2Q86TB3 2170 aa12.15□□□□□ -0.47
IRF3-225ENST00000600022 CDHR4A6H8M9 788 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 ARRDC5A6NEK1 342 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 ALG1L2C9J202 215 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 H3BNH8 94 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 FAAHO00519 579 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 NDUFB5O43674 189 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 DANCRP0C864 163 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 FCGR2AP12318 317 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 EDNRAP25101 427 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 AGTR1P30556 359 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 ACVR1BP36896 505 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 IFNGR2P38484 337 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 CAPGP40121 348 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 RPS6KA3P51812 740 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 ATP12AP54707 1039 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 PLAURQ03405 335 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 PPP1R8Q12972 351 aaKnown RBP12.14□□□□□ -0.47
IRF3-225ENST00000600022 PDK3Q15120 406 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 MICAQ29983 383 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 PLPPR5Q32ZL2 321 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 SEZ6L2Q6UXD5 910 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 RRM2BQ7LG56 351 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 TSEN54Q7Z6J9 526 aaKnown RBP12.14□□□□□ -0.47
IRF3-225ENST00000600022 GTPBP8Q8N3Z3 284 aaPredicted RBP12.14□□□□□ -0.47
IRF3-225ENST00000600022 TOR1AIP2Q8NFQ8 470 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 OR10G2Q8NGC3 310 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 OR52J3Q8NH60 311 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 OR2V1Q8NHB1 315 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 ABHD3Q8WU67 409 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 SLC35B4Q969S0 331 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 SRXN1Q9BYN0 137 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 REG4Q9BYZ8 158 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 CXorf56Q9H5V9 222 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 NMNAT1Q9HAN9 279 aaPredicted RBP12.14□□□□□ -0.47
IRF3-225ENST00000600022 KRCC1Q9NPI7 259 aaPredicted RBP12.14□□□□□ -0.47
IRF3-225ENST00000600022 UBQLN4Q9NRR5 601 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 MAGED1Q9Y5V3 778 aaPredicted RBP12.14□□□□□ -0.47
IRF3-225ENST00000600022 CADP27708 2225 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 NBEAL1Q6ZS30 2694 aa12.14□□□□□ -0.47
IRF3-225ENST00000600022 C7orf72A4D263 438 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 SCDO00767 359 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 PPP3CBP16298 524 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 PSMB1P20618 241 aaKnown RBP12.13□□□□□ -0.47
IRF3-225ENST00000600022 SFTPDP35247 375 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 HMGA2P52926 109 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 RAC1P63000 192 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 ST3GAL3Q11203 375 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 TAB1Q15750 504 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 PDZK1Q5T2W1 519 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 MRPL2Q5T653 305 aaKnown RBP12.13□□□□□ -0.47
IRF3-225ENST00000600022 HBMQ6B0K9 141 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 TBPL2Q6SJ96 375 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 BEND4Q6ZU67 534 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 TUSC5Q8IXB3 177 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 ZNF440Q8IYI8 595 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 GABRG1Q8N1C3 465 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 FAM71CQ8NEG0 241 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 OR4D11Q8NGI4 311 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 OR6T1Q8NGN1 323 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 TFAP2CQ92754 450 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 SLC38A4Q969I6 547 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 ANKRD60Q9BZ19 345 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 ANKRD19PQ9H560 264 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 SMURF2Q9HAU4 748 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 ACER3Q9NUN7 267 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 VNN3Q9NY84 501 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 SELENONQ9NZV5 590 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 TESQ9UGI8 421 aaKnown RBP12.13□□□□□ -0.47
IRF3-225ENST00000600022 GDF2Q9UK05 429 aaPredicted RBP12.13□□□□□ -0.47
IRF3-225ENST00000600022 SLC35A3Q9Y2D2 325 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 POFUT2Q9Y2G5 429 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 GPR52Q9Y2T5 361 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 SVEP1Q4LDE5 3571 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 CR1P17927 2039 aa12.13□□□□□ -0.47
IRF3-225ENST00000600022 CHD3Q12873 2000 aaKnown RBP12.13□□□□□ -0.47
IRF3-225ENST00000600022 A0A1W2PQD3 144 aa12.12□□□□□ -0.47
IRF3-225ENST00000600022 A0A1W2PRQ8 180 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms