RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 TBPL2Q6SJ96 375 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 ZNF730Q6ZMV8 503 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 Q6ZT83 130 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 C22orf34Q6ZV56 151 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 RRM2BQ7LG56 351 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 DHFR2Q86XF0 187 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 STEAP2Q8NFT2 490 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 MCUR1Q96AQ8 359 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 TMEM45BQ96B21 275 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 S100PBPQ96BU1 408 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 CCDC124Q96CT7 223 aaKnown RBP9.79□□□□□ -0.84
LIG1-211ENST00000596457 PIK3IP1Q96FE7 263 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 EMC6Q9BV81 110 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 HDHD5Q9BXW7 423 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 POLDIP3Q9BY77 421 aaKnown RBP9.79□□□□□ -0.84
LIG1-211ENST00000596457 SLC7A10Q9NS82 523 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 C20orf141Q9NUB4 165 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 ASB6Q9NWX5 421 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 MRPL39Q9NYK5 338 aaKnown RBP9.79□□□□□ -0.84
LIG1-211ENST00000596457 ZNF226Q9NYT6 803 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 PRPF19Q9UMS4 504 aaKnown RBP9.79□□□□□ -0.84
LIG1-211ENST00000596457 TESMINQ9Y4I5 508 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 ENPP4Q9Y6X5 453 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 FREM1Q5H8C1 2179 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 A0A1W2PR80 420 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 OR7A10O76100 309 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 THRBP10828 461 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 PSMB1P20618 241 aaKnown RBP9.78□□□□□ -0.84
LIG1-211ENST00000596457 ATP6V1B2P21281 511 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 LSM11P83369 360 aaKnown RBP eCLIP9.78□□□□□ -0.84
LIG1-211ENST00000596457 VLDLRP98155 873 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 MS4A2Q01362 244 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 PUDPQ08623 228 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 P2RY6Q15077 328 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 FGD3Q5JSP0 725 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 NANOGNBQ7Z5D8 188 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 TSEN54Q7Z6J9 526 aaKnown RBP9.78□□□□□ -0.84
LIG1-211ENST00000596457 CDK20Q8IZL9 346 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 OFCC1Q8IZS5 231 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 ARHGAP24Q8N264 748 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 ZNF433Q8N7K0 673 aaPredicted RBP9.78□□□□□ -0.84
LIG1-211ENST00000596457 SCAIQ8N9R8 606 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 OR52J3Q8NH60 311 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 TXNDC15Q96J42 360 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 LRGUKQ96M69 825 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 ZNF426Q9BUY5 554 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 SLC19A3Q9BZV2 496 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 C1orf21Q9H246 121 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 SLCO5A1Q9H2Y9 848 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 FKRPQ9H9S5 495 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 MED29Q9NX70 200 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 ACTR3BQ9P1U1 418 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 B3GAT1Q9P2W7 334 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 ZNF229Q9UJW7 825 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 MED13LQ71F56 2210 aa9.78□□□□□ -0.84
LIG1-211ENST00000596457 ABCA2Q9BZC7 2435 aa9.77□□□□□ -0.84
LIG1-211ENST00000596457 SLC35F4A4IF30 521 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 ZNF726A6NNF4 738 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 AKAP8O43823 692 aaKnown RBP9.77□□□□□ -0.85
LIG1-211ENST00000596457 SLC43A1O75387 559 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 UPK3AO75631 287 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 F13BP05160 661 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 FABP3P05413 133 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 THBDP07204 575 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 H1F0P07305 194 aaKnown RBP9.77□□□□□ -0.85
LIG1-211ENST00000596457 SAGP10523 405 aaPredicted RBP9.77□□□□□ -0.85
LIG1-211ENST00000596457 PPP3CBP16298 524 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 ITGA2P17301 1181 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 RHCEP18577 417 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 BIDP55957 195 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 SPIBQ01892 262 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 CAMK2DQ13557 499 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 TRIM25Q14258 630 aaKnown RBP9.77□□□□□ -0.85
LIG1-211ENST00000596457 MELKQ14680 651 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 LAPTM4AQ15012 233 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 DAZAP2Q15038 168 aaPredicted RBP9.77□□□□□ -0.85
LIG1-211ENST00000596457 DNAL1Q4LDG9 190 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 SLC46A3Q7Z3Q1 461 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 ZDHHC21Q8IVQ6 265 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 NRMQ8IXM6 262 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 GPR137CQ8N3F9 429 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 POMGNT2Q8NAT1 580 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 ADPRHL1Q8NDY3 354 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 OR52N5Q8NH56 324 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 SLC7A6OSQ96CW6 309 aaPredicted RBP9.77□□□□□ -0.85
LIG1-211ENST00000596457 BPIFA2Q96DR5 249 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 C7orf34Q96L11 122 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 ALKBH3Q96Q83 286 aaPredicted RBP9.77□□□□□ -0.85
LIG1-211ENST00000596457 BTBD10Q9BSF8 475 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 NMNAT1Q9HAN9 279 aaPredicted RBP9.77□□□□□ -0.85
LIG1-211ENST00000596457 RASSF1Q9NS23 344 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 MAN2C1Q9NTJ4 1040 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 TAS2R5Q9NYW4 299 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 NDUFAF4Q9P032 175 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 NOX1Q9Y5S8 564 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 SPG11Q96JI7 2443 aa9.77□□□□□ -0.85
LIG1-211ENST00000596457 A0A087WUU8 490 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 EFCAB9A8MZ26 197 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 ZNF587BE7ETH6 402 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 M0R3G1 203 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms