RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ENPP4Q9Y6X5 453 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 ZNF726A6NNF4 738 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 ENO4A6NNW6 628 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 ZNF587BE7ETH6 402 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 LRRN3E7EW58 273 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 FUT1P19526 365 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 POU3F1Q03052 451 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 FOXD4Q12950 439 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 PPA1Q15181 289 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 TAB1Q15750 504 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 ALKBH2Q6NS38 261 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 C22orf34Q6ZV56 151 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 RRM2BQ7LG56 351 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 NANOGNBQ7Z5D8 188 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 CDK20Q8IZL9 346 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 RNF113BQ8IZP6 322 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 C17orf78Q8N4C9 275 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 ANKK1Q8NFD2 765 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 MCUR1Q96AQ8 359 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 MUS81Q96NY9 551 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 MUC13Q9H3R2 512 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 ANKRD19PQ9H560 264 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 MEPEQ9NQ76 525 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 PRPF19Q9UMS4 504 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 ITPR2Q14571 2701 aa15.23■□□□□ 0.03
SHKBP1-212ENST00000596163 OR5H1A6NKK0 313 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 DEFB108AA8MXU0 73 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 PDLIM1O00151 329 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 ARPC2O15144 300 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 KLF4O43474 513 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 RNF13O43567 381 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 TRAF3IP2O43734 574 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 RAD51DO75771 328 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 OR7A10O76100 309 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 HPRP00739 348 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 T-ENOLP0DO92 83 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 RHCEP18577 417 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 HOXC12P31275 282 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 UGT2B15P54855 530 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 HMBOX1Q6NT76 420 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 RINLQ6ZS11 566 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 CDH24Q86UP0 819 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 GPR137CQ8N3F9 429 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 PFN4Q8NHR9 129 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 LIPHQ8WWY8 451 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 POP5Q969H6 163 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 ADAD1Q96M93 576 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 ESRP2Q9H6T0 727 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 B3GAT2Q9NPZ5 323 aa15.22■□□□□ 0.03
SHKBP1-212ENST00000596163 ABCA12Q86UK0 2595 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 C11orf98E9PRG8 122 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 BLOC1S5-TXNDC5H3BN57 136 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 J3KTA2 159 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 ZNF432O94892 652 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 STAMBPO95630 424 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 ITGA5P08648 1049 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 ASAH2BP0C7U1 165 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 PAX7P23759 505 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 MSX2P35548 267 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 SH3BGRP55822 239 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 SMIM11AP58511 58 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 GABRA6Q16445 453 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 MTX3Q5HYI7 312 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 ZNF730Q6ZMV8 503 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 SLC46A3Q7Z3Q1 461 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 ACOT11Q8WXI4 607 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 LRR1Q96L50 414 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 NMNAT1Q9HAN9 279 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 TAS2R5Q9NYW4 299 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 ACTR3BQ9P1U1 418 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 RHCGQ9UBD6 479 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 AMDHD2Q9Y303 409 aa15.21■□□□□ 0.03
SHKBP1-212ENST00000596163 TEX15Q9BXT5 2789 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 SLC35F4A4IF30 521 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 RPL36A-HNRNPH2H7BZ11 118 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 FFAR1O14842 300 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 UPK3AO75631 287 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 SERPINI2O75830 405 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 WNT11O96014 354 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 H1F0P07305 194 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 IFI30P13284 250 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 HLA-DOBP13765 273 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 ANKDD1AQ495B1 522 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 C9orf135Q5VTT2 229 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 KLHL17Q6TDP4 642 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 KLHL24Q6TFL4 600 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 LRRC17Q8N6Y2 441 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 NINJ1Q92982 152 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 BPIFA2Q96DR5 249 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 PLPPR2Q96GM1 343 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 BOD1Q96IK1 185 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 OR2M2Q96R28 347 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 TAS2R1Q9NYW7 299 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 NDUFAF4Q9P032 175 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 MAGED1Q9Y5V3 778 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 APCP25054 2843 aa15.2■□□□□ 0.02
SHKBP1-212ENST00000596163 A0A1W2PRG6 482 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 HOXB1P14653 301 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 IFNGR1P15260 489 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms