RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 SEC14L4Q9UDX3 406 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 YES1P07947 543 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 STSP08842 583 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 ZNF14P17017 642 aaPredicted RBP8.99□□□□□ -0.97
LIG3-216ENST00000593099 GALNSP34059 522 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 MEOX1P50221 254 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 HLCSP50747 726 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 EBPQ15125 230 aaKnown RBP8.99□□□□□ -0.97
LIG3-216ENST00000593099 SPRED3Q2MJR0 410 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 PLAG1Q6DJT9 500 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 VASNQ6EMK4 673 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 TBPL2Q6SJ96 375 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 SLC43A2Q8N370 569 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 C1orf216Q8TAB5 229 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 HOXB13Q92826 284 aaPredicted RBP8.99□□□□□ -0.97
LIG3-216ENST00000593099 C11orf24Q96F05 449 aaPredicted RBP8.99□□□□□ -0.97
LIG3-216ENST00000593099 BCL2L14Q9BZR8 327 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 A0A1W2PNR3 127 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 M0R082 166 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 FPR3P25089 353 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 ETV1P50549 477 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 CLDN15P56746 228 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 SLC36A2Q495M3 483 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 ZNF813Q6ZN06 617 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 DPY19L2P2Q6ZN68 376 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 USP43Q70EL4 1123 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 ZNF367Q7RTV3 350 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 OR1J2Q8NGS2 313 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 ZNF417Q8TAU3 575 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 ANKRD9Q96BM1 317 aaPredicted RBP8.99□□□□□ -0.97
LIG3-216ENST00000593099 ZNF587Q96SQ5 575 aaPredicted RBP8.99□□□□□ -0.97
LIG3-216ENST00000593099 ZNF350Q9GZX5 532 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 SLC38A1Q9H2H9 487 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 C12orf49Q9H741 205 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 CHST11Q9NPF2 352 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 TCRBV16S1A1N1A0A5B0 115 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 PLSCR5A0PG75 271 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 ANKUB1A6NFN9 424 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 CYR61O00622 381 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 PRAMEF4O60810 478 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 GSTT2P0CG29 244 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 GSTT2BP0CG30 244 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 KEAP1Q14145 624 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 SPHARQ15513 63 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 SYT14P1Q58G82 188 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 PRAMEF9Q5VWM5 478 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 KLBQ86Z14 1044 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 RBM45Q8IUH3 476 aaKnown RBP8.99□□□□□ -0.97
LIG3-216ENST00000593099 LRRC56Q8IYG6 542 aaPredicted RBP8.99□□□□□ -0.97
LIG3-216ENST00000593099 ABCB9Q9NP78 766 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 TUBG2Q9NRH3 451 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 KLHL13Q9P2N7 655 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 PILRAQ9UKJ1 303 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 RASD1Q9Y272 281 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 HDGFL3Q9Y3E1 203 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 FKBP7Q9Y680 259 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 PATJQ8NI35 1801 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 TANC1Q9C0D5 1861 aa8.99□□□□□ -0.97
LIG3-216ENST00000593099 VWA8A3KMH1 1905 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 OR6C65A6NJZ3 312 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 KDM4EB2RXH2 506 aaPredicted RBP8.98□□□□□ -0.97
LIG3-216ENST00000593099 B8ZZF3 427 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 LCKP06239 509 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 IL18Q14116 193 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 PROX2Q3B8N5 592 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 B3GNTL1Q67FW5 361 aaPredicted RBP8.98□□□□□ -0.97
LIG3-216ENST00000593099 PLET1Q6UQ28 207 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 PRICKLE2Q7Z3G6 844 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 ZBTB46Q86UZ6 589 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 ZNF227Q86WZ6 799 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 OR10A2Q9H208 303 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 DYNLRB1Q9NP97 96 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 ACER3Q9NUN7 267 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 SIP14410 1827 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 KIAA0513O60268 411 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 WNT11O96014 354 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 GASTP01350 101 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 RAB40ALP0C0E4 278 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 TNFSF4P23510 183 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 RORCP51449 518 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 ZNF704Q6ZNC4 412 aaPredicted RBP8.98□□□□□ -0.97
LIG3-216ENST00000593099 MS4A15Q8N5U1 240 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 OR2V1Q8NHB1 315 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 ITPKCQ96DU7 683 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 SLC29A1Q99808 456 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 IKZF5Q9H5V7 419 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 EGLN3Q9H6Z9 239 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 IFT46Q9NQC8 304 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 COMMD9Q9P000 198 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 PROCRQ9UNN8 238 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 SLCO1B1Q9Y6L6 691 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 ACACAQ13085 2346 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 CBX7O95931 251 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 GYPBP06028 91 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 GRK5P34947 590 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 TMPRSS3P57727 454 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 ASB18Q6ZVZ8 466 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 DMRTB1Q96MA1 342 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 SARGQ9BW04 601 aa8.98□□□□□ -0.97
LIG3-216ENST00000593099 OR11A1Q9GZK7 315 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms