RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	ANXA11	P50995	505 aa	Known RBP	15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	HOXC5	Q00444	222 aa		15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	ATG16L1	Q676U5	607 aa		15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	WDFY1	Q8IWB7	410 aa		15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	SLC38A5	Q8WUX1	472 aa		15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	MRPL24	Q96A35	216 aa	Known RBP	15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	MS4A3	Q96HJ5	214 aa		15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	OR2M2	Q96R28	347 aa		15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	OR52E6	Q96RD3	313 aa		15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	ROPN1B	Q9BZX4	212 aa	Predicted RBP	15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	ROPN1	Q9HAT0	212 aa	Predicted RBP	15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	PNPO	Q9NVS9	261 aa		15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	P2RX2	Q9UBL9	471 aa		15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	SPEF1	Q9Y4P9	236 aa		15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	GPR45	Q9Y5Y3	372 aa		15.73	■□□□□ 0.11
CIRBP-238	ENST00000592412	SDHD	O14521	159 aa		15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	TRAF3IP2	O43734	574 aa	Predicted RBP	15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	ZNF43	P17038	809 aa		15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	NCF2	P19878	526 aa	Predicted RBP	15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	COL8A2	P25067	703 aa		15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	SLC1A6	P48664	564 aa		15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	GLCCI1	Q86VQ1	547 aa		15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	LRP11	Q86VZ4	500 aa		15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	OXGR1	Q96P68	337 aa		15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	SPATA9	Q9BWV2	254 aa		15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	NARFL	Q9H6Q4	476 aa		15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	HIF1AN	Q9NWT6	349 aa		15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	ZNF224	Q9NZL3	707 aa		15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	MYEF2	Q9P2K5	600 aa	Known RBP	15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	CMAHP	Q9Y471	501 aa		15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	TG	P01266	2768 aa		15.72	■□□□□ 0.11
CIRBP-238	ENST00000592412	VSTM5	A8MXK1	200 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	ZNF99	A8MXY4	864 aa	Predicted RBP	15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412		M0R082	166 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	BIRC5	O15392	142 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	SYNGR3	O43761	229 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	HLA-H	P01893	362 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	ZNF35	P13682	527 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	ZNF14	P17017	642 aa	Predicted RBP	15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	TCN1	P20061	433 aa	Predicted RBP	15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	EVX1	P49640	407 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	SEC24C	P53992	1094 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	CRISP3	P54108	245 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	IFFO1	Q0D2I5	559 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	GTDC1	Q4AE62	458 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	UGT2A3	Q6UWM9	527 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	C1orf229	Q6ZS94	237 aa	Predicted RBP	15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	GPR137C	Q8N3F9	429 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	ZNF417	Q8TAU3	575 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	YIPF5	Q969M3	257 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	TAAR8	Q969N4	342 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	VPS33A	Q96AX1	596 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	TMEM186	Q96B77	213 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	TMEM19	Q96HH6	336 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	ZNF587	Q96SQ5	575 aa	Predicted RBP	15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	LPAR2	Q9HBW0	351 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	USP22	Q9UPT9	525 aa		15.71	■□□□□ 0.11
CIRBP-238	ENST00000592412	IGKV1D-42	A0A075B6H8	117 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	RGS9	O75916	674 aa	Predicted RBP	15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	NCR1	O76036	304 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	KRT75	O95678	551 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	HPR	P00739	348 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	BGN	P21810	368 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	PCMT1	P22061	227 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	ALDH3B1	P43353	468 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	CAPZA2	P47755	286 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	VSNL1	P62760	191 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	MPP2	Q14168	576 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	MAD2L1BP	Q15013	274 aa	Predicted RBP	15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	C6orf89	Q6UWU4	347 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	NHLRC1	Q6VVB1	395 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	IL17RD	Q8NFM7	739 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	SYT3	Q9BQG1	590 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	CALML5	Q9NZT1	146 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	REV1	Q9UBZ9	1251 aa		15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	15.7	■□□□□ 0.1	1e-9	■□□□□ 8.6
CIRBP-238	ENST00000592412		V9GYY5	206 aa	Predicted RBP	15.7	■□□□□ 0.1
CIRBP-238	ENST00000592412		M0R233	179 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412		M0R3G1	203 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	RFXANK	O14593	260 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	KCNAB3	O43448	404 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	MSMB	P08118	114 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	SAG	P10523	405 aa	Predicted RBP	15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	HLA-DOB	P13765	273 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	GRPR	P30550	384 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	CRAT	P43155	626 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	GPR6	P46095	362 aa	Predicted RBP	15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	DSTN	P60981	165 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	LMO4	P61968	165 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	LRRC74A	Q0VAA2	488 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	LARS2	Q15031	903 aa	Known RBP	15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	FXN	Q16595	210 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	SLC9B1	Q4ZJI4	515 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	ZNF627	Q7L945	461 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	COMTD1	Q86VU5	262 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	CCDC36	Q8IYA8	594 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	PIK3C3	Q8NEB9	887 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	TPT1P8	Q9HAU6	139 aa		15.69	■□□□□ 0.1
CIRBP-238	ENST00000592412	ZNF275	Q9NSD4	429 aa	Predicted RBP	15.69	■□□□□ 0.1

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