RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 A0A1W2PRQ8 180 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 C11orf98E9PRG8 122 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 ACOT8O14734 319 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 HPRP00739 348 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 IGHV3-9P01782 118 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 ASAH2BP0C7U1 165 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 FUT4P22083 530 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 SPIBQ01892 262 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 POU3F1Q03052 451 aaPredicted RBP18.84■□□□□ 0.61
ATG4D-212ENST00000590096 CHRNB3Q05901 458 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 DGCR6Q14129 220 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 FAM98BQ52LJ0 330 aaKnown RBP18.84■□□□□ 0.61
ATG4D-212ENST00000590096 NIPAL3Q6P499 406 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 STAC2Q6ZMT1 411 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 MBOAT2Q6ZWT7 520 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 LURAP1LQ8IV03 231 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 CDK20Q8IZL9 346 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 FAM222BQ8WU58 562 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 BPIFA2Q96DR5 249 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 ZNF347Q96SE7 839 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 HDHD5Q9BXW7 423 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 SLCO5A1Q9H2Y9 848 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 TESMINQ9Y4I5 508 aa18.84■□□□□ 0.61
ATG4D-212ENST00000590096 A0A087WUU8 490 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 SH3D21A4FU49 640 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 BLOC1S5-TXNDC5H3BN57 136 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 RNF13O43567 381 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 SERPINI2O75830 405 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 PSMB1P20618 241 aaKnown RBP18.83■□□□□ 0.6
ATG4D-212ENST00000590096 IL32P24001 234 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 CCKARP32238 428 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 ITGADQ13349 1161 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 FLOT2Q14254 428 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 IQCCQ4KMZ1 466 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 SFRP5Q5T4F7 317 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 PXKQ7Z7A4 578 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 OR52J3Q8NH60 311 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 SLC7A13Q8TCU3 470 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 KISS1RQ969F8 398 aaPredicted RBP18.83■□□□□ 0.6
ATG4D-212ENST00000590096 DACH2Q96NX9 599 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 MED18Q9BUE0 208 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 KRCC1Q9NPI7 259 aaPredicted RBP18.83■□□□□ 0.6
ATG4D-212ENST00000590096 ASB6Q9NWX5 421 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 MALT1Q9UDY8 824 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 RCE1Q9Y256 329 aa18.83■□□□□ 0.6
ATG4D-212ENST00000590096 CRYBG3Q68DQ2 2970 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 OR6C65A6NJZ3 312 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 AQP12BA6NM10 295 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 EBAG9O00559 213 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 TRAF3IP2O43734 574 aaPredicted RBP18.82■□□□□ 0.6
ATG4D-212ENST00000590096 KRT33AO76009 404 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 GADD45GO95257 159 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 SAGP10523 405 aaPredicted RBP18.82■□□□□ 0.6
ATG4D-212ENST00000590096 EPXP11678 715 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 SELENOPP49908 381 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 PRKCDQ05655 676 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 ZP4Q12836 540 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 FAPQ12884 760 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 PODNL1Q6PEZ8 512 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 TBPL2Q6SJ96 375 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 PIWIL3Q7Z3Z3 882 aaKnown RBP18.82■□□□□ 0.6
ATG4D-212ENST00000590096 AQP12AQ8IXF9 295 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 POMGNT2Q8NAT1 580 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 ANKK1Q8NFD2 765 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 STEAP2Q8NFT2 490 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 LIPHQ8WWY8 451 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 DHRS1Q96LJ7 313 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 ACTR6Q9GZN1 396 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 OR10A4Q9H209 315 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 LRMDAQ9H2I8 198 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 MMADHCQ9H3L0 296 aaPredicted RBP18.82■□□□□ 0.6
ATG4D-212ENST00000590096 POMPQ9Y244 141 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 TMEM5Q9Y2B1 443 aa18.82■□□□□ 0.6
ATG4D-212ENST00000590096 CELSR2Q9HCU4 2923 aa18.81■□□□□ 0.6
ATG4D-212ENST00000590096 CASKO14936 926 aa18.81■□□□□ 0.6
ATG4D-212ENST00000590096 SLC43A1O75387 559 aa18.81■□□□□ 0.6
ATG4D-212ENST00000590096 HLA-DOBP13765 273 aa18.81■□□□□ 0.6
ATG4D-212ENST00000590096 PPP3CBP16298 524 aa18.81■□□□□ 0.6
ATG4D-212ENST00000590096 RRM2P31350 389 aa18.81■□□□□ 0.6
ATG4D-212ENST00000590096 LSM11P83369 360 aaKnown RBP eCLIP18.81■□□□□ 0.6
ATG4D-212ENST00000590096 TSPO2Q5TGU0 170 aa18.81■□□□□ 0.6
ATG4D-212ENST00000590096 ANKRD34AQ69YU3 496 aa18.81■□□□□ 0.6
ATG4D-212ENST00000590096 BHLHA15Q7RTS1 189 aaPredicted RBP18.81■□□□□ 0.6
ATG4D-212ENST00000590096 ABHD12BQ7Z5M8 362 aaPredicted RBP18.81■□□□□ 0.6
ATG4D-212ENST00000590096 WFIKKN1Q96NZ8 548 aa18.81■□□□□ 0.6
ATG4D-212ENST00000590096 SLC7A10Q9NS82 523 aa18.81■□□□□ 0.6
ATG4D-212ENST00000590096 TAS2R5Q9NYW4 299 aa18.81■□□□□ 0.6
ATG4D-212ENST00000590096 TRBV4-1A0A0J9YWV2 114 aa18.8■□□□□ 0.6
ATG4D-212ENST00000590096 EFCAB9A8MZ26 197 aa18.8■□□□□ 0.6
ATG4D-212ENST00000590096 LYZL6O75951 148 aa18.8■□□□□ 0.6
ATG4D-212ENST00000590096 COX5AP20674 150 aa18.8■□□□□ 0.6
ATG4D-212ENST00000590096 IGHV1-2P23083 117 aa18.8■□□□□ 0.6
ATG4D-212ENST00000590096 SSTR2P30874 369 aa18.8■□□□□ 0.6
ATG4D-212ENST00000590096 DNAJA1P31689 397 aaKnown RBP18.8■□□□□ 0.6
ATG4D-212ENST00000590096 MAGEA2P43356 314 aa18.8■□□□□ 0.6
ATG4D-212ENST00000590096 RPL18Q07020 188 aaKnown RBP18.8■□□□□ 0.6
ATG4D-212ENST00000590096 SPATA24Q86W54 205 aa18.8■□□□□ 0.6
ATG4D-212ENST00000590096 C14orf79Q96F83 325 aa18.8■□□□□ 0.6
ATG4D-212ENST00000590096 USB1Q9BQ65 265 aaKnown RBP18.8■□□□□ 0.6
ATG4D-212ENST00000590096 MCCC2Q9HCC0 563 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms