RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 SLC22A10Q63ZE4 541 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 NPSR1Q6W5P4 371 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 MED25Q71SY5 747 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 WFDC8Q8IUA0 241 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 DMRTC2Q8IXT2 367 aaPredicted RBP6.76□□□□□ -1.33
ZNF540-206ENST00000589117 CARFQ8N187 725 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 LRRC17Q8N6Y2 441 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF615Q8N8J6 731 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 NPEPL1Q8NDH3 523 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 C17orf47Q8NEP4 570 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 OR4M1Q8NGD0 313 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 OR5J2Q8NH18 312 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF563Q8TA94 476 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 LMX1AQ8TE12 382 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 LIPHQ8WWY8 451 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 THRSPQ92748 146 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 PELI1Q96FA3 418 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF285Q96NJ3 590 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 OR1F2PQ96R84 312 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 GPX7Q96SL4 187 aaPredicted RBP6.76□□□□□ -1.33
ZNF540-206ENST00000589117 NMNAT3Q96T66 252 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 TMEM246Q9BRR3 403 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 GON7Q9BXV9 100 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 RAB33BQ9H082 229 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 PCED1AQ9H1Q7 454 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 DPAGT1Q9H3H5 408 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 C12orf10Q9HB07 376 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 B3GAT2Q9NPZ5 323 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 RXFP3Q9NSD7 469 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 PAQR5Q9NXK6 330 aaPredicted RBP6.76□□□□□ -1.33
ZNF540-206ENST00000589117 MRPL39Q9NYK5 338 aaKnown RBP6.76□□□□□ -1.33
ZNF540-206ENST00000589117 GRHPRQ9UBQ7 328 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 FBXL4Q9UKA2 621 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 SPATA2Q9UM82 520 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 CAMK2AQ9UQM7 478 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 ALG5Q9Y673 324 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 CACNG2Q9Y698 323 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 TMEM14AQ9Y6G1 99 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 ARPC4-TTLL3A0A0A6YYG9 625 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 A0A1B0GTQ1 180 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 FITM1A5D6W6 292 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 RHPN2P1A8MT19 583 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 C2CD4DB7Z1M9 353 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 LRRN3E7EW58 273 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 EEF1E1O43324 174 aaKnown RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 HCRTR1O43613 425 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF432O94892 652 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 IL33O95760 270 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 EPXP11678 715 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ARSBP15848 533 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 SRMP19623 302 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 NAA10P41227 235 aaPredicted RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 SLC25A1P53007 311 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 AP3S2P59780 193 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 MAT1AQ00266 395 aaKnown RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 IFITM2Q01629 132 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 FHL1Q13642 323 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ERV3-1Q14264 604 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 NNATQ16517 81 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ALG10Q5BKT4 473 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 GPR139Q6DWJ6 353 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 RPTNQ6XPR3 784 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ASB18Q6ZVZ8 466 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 PLCZ1Q86YW0 608 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 LIX1LQ8IVB5 337 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 SFTPA2Q8IWL1 248 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 NLGN4YQ8NFZ3 816 aaPredicted RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 OR2T4Q8NH00 348 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 SVIPQ8NHG7 77 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 MOSPD2Q8NHP6 518 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 C3orf49Q96BT1 292 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 TGM7Q96PF1 710 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 LRRN3Q9H3W5 708 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ZCCHC4Q9H5U6 513 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 NCDNQ9UBB6 729 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ST6GALNAC2Q9UJ37 374 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 GDF2Q9UK05 429 aaPredicted RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ING4Q9UNL4 249 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF281Q9Y2X9 895 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ARHGEF17Q96PE2 2063 aaPredicted RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 CDH23Q9H251 3354 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 A8MV72 311 aaPredicted RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 HRKO00198 91 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 RENP00797 406 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 C1QBP02746 253 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 EIF4EP06730 217 aaKnown RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 IL12BP29460 328 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 SDHAP31040 664 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 THBS2P35442 1172 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 RAG2P55895 527 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 OR10A3P58181 314 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 RPS4XP62701 263 aaKnown RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ERVK-25P63136 954 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 RIPPLY1Q0D2K3 151 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 FAPQ12884 760 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 GPR176Q14439 515 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 NTRK2Q16620 822 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 FAM27D1Q5T7N8 215 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 LEG1Q6P5S2 330 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 SLC16A9Q7RTY1 509 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms