RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 RIMS3Q9UJD0 308 aa10.2□□□□□ -0.78
RFX1-204ENST00000588885 IFT52Q9Y366 437 aa10.2□□□□□ -0.78
RFX1-204ENST00000588885 AP4S1Q9Y587 144 aa10.2□□□□□ -0.78
RFX1-204ENST00000588885 A0A1W2PR80 420 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 CIB4A0PJX0 185 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 LIPT2A6NK58 231 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 ARHGEF9O43307 516 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 EIF1BO60739 113 aaKnown RBP10.19□□□□□ -0.78
RFX1-204ENST00000588885 RAD51DO75771 328 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 DIRAS1O95057 198 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 BAG2O95816 211 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 FABP3P05413 133 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 HOXC12P31275 282 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 IDUAP35475 653 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 OR1E2P47887 323 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 NR1H2P55055 460 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 FOXG1P55316 489 aaPredicted RBP10.19□□□□□ -0.78
RFX1-204ENST00000588885 H3F3AP84243 136 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 FAPQ12884 760 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 PDK3Q15120 406 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 NPTX1Q15818 432 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 OTUD3Q5T2D3 398 aaPredicted RBP10.19□□□□□ -0.78
RFX1-204ENST00000588885 RNF220Q5VTB9 566 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 FBXW9Q5XUX1 488 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 TSEN54Q7Z6J9 526 aaKnown RBP10.19□□□□□ -0.78
RFX1-204ENST00000588885 GPAT4Q86UL3 456 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 CARM1Q86X55 608 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 ZDHHC21Q8IVQ6 265 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 PQLC1Q8N2U9 271 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 ZNF433Q8N7K0 673 aaPredicted RBP10.19□□□□□ -0.78
RFX1-204ENST00000588885 RASSF5Q8WWW0 418 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 LZICQ8WZA0 190 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 PROX1Q92786 737 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 PIGTQ969N2 578 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 SLC25A36Q96CQ1 311 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 POM121Q96HA1 1249 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 ARHGDIGQ99819 225 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 C1QTNF6Q9BXI9 259 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 OR10A4Q9H209 315 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 DCLRE1BQ9H816 532 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 STX18Q9P2W9 335 aaKnown RBP10.19□□□□□ -0.78
RFX1-204ENST00000588885 BAG5Q9UL15 447 aa10.19□□□□□ -0.78
RFX1-204ENST00000588885 FREM1Q5H8C1 2179 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 DPRXA6NFQ7 191 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 A8MVM7 634 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 J3KTA2 159 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 GPR171O14626 319 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 DNPH1O43598 174 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 CD3EP07766 207 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 FOSL1P15407 271 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 SLC16A1P53985 500 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 BSPH1Q075Z2 132 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 PPA1Q15181 289 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 NRF1Q16656 503 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 IQCCQ4KMZ1 466 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 Q5PR19 223 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 C1orf140Q5VVS0 124 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 DEF8Q6ZN54 512 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 C20orf204Q6ZNR8 217 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 Q71RC1 249 aaPredicted RBP10.18□□□□□ -0.78
RFX1-204ENST00000588885 KRTAP1-3Q8IUG1 177 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 RBM45Q8IUH3 476 aaKnown RBP10.18□□□□□ -0.78
RFX1-204ENST00000588885 OR52N5Q8NH56 324 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 LILRB1Q8NHL6 650 aaPredicted RBP10.18□□□□□ -0.78
RFX1-204ENST00000588885 RNF217Q8TC41 542 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 POP5Q969H6 163 aaKnown RBP10.18□□□□□ -0.78
RFX1-204ENST00000588885 C3orf49Q96BT1 292 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 MUCL1Q96DR8 90 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 C7orf34Q96L11 122 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 SMR3AQ99954 134 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 TMEM204Q9BSN7 226 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 TAPBPLQ9BX59 468 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 POTEKPQ9BYX7 375 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 AMBRA1Q9C0C7 1298 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 ESRP2Q9H6T0 727 aaKnown RBP10.18□□□□□ -0.78
RFX1-204ENST00000588885 VNN3Q9NY84 501 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 RPS6KB2Q9UBS0 482 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 SLC13A4Q9UKG4 626 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 SH3GLB1Q9Y371 365 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 RNF115Q9Y4L5 304 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 FLVCR1Q9Y5Y0 555 aa10.18□□□□□ -0.78
RFX1-204ENST00000588885 USF3Q68DE3 2245 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 HS3ST1O14792 307 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 LGI1O95970 557 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 IFNW1P05000 195 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 FCGR1AP12314 374 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 CDH2P19022 906 aaPredicted RBP10.17□□□□□ -0.78
RFX1-204ENST00000588885 RPS5P46782 204 aaKnown RBP10.17□□□□□ -0.78
RFX1-204ENST00000588885 YAP1P46937 504 aaKnown RBP10.17□□□□□ -0.78
RFX1-204ENST00000588885 ZNF83P51522 516 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 MAP2K6P52564 334 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 RGS8P57771 180 aaPredicted RBP10.17□□□□□ -0.78
RFX1-204ENST00000588885 SLC17A1Q14916 467 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 ATP6AP1Q15904 470 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 ZSWIM7Q19AV6 140 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 NCMAPQ5T1S8 102 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 TMEM225Q6GV28 225 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 ADAM5Q6NVV9 412 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 PAQR6Q6TCH4 344 aa10.17□□□□□ -0.78
RFX1-204ENST00000588885 AMIGO2Q86SJ2 522 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms