RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 CLDN17P56750 224 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 UBE2NP61088 152 aaKnown RBP10.06□□□□□ -0.8
LIG3-207ENST00000586119 EGR4Q05215 589 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 EFNB3Q15768 340 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 ZSWIM7Q19AV6 140 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 WBP2NLQ6ICG8 309 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 MSANTD1Q6ZTZ1 278 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 SERPINA11Q86U17 422 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 CARM1Q86X55 608 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 WDFY1Q8IWB7 410 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 CDK20Q8IZL9 346 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 TSPEARQ8WU66 669 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 KTI12Q96EK9 354 aaPredicted RBP10.06□□□□□ -0.8
LIG3-207ENST00000586119 SNX18Q96RF0 628 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 KCNS3Q9BQ31 491 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 KATNB1Q9BVA0 655 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 PTDSS2Q9BVG9 487 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 TAPBPLQ9BX59 468 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 FAM107BQ9H098 131 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 ZNF385DQ9H6B1 395 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 FTCDNL1E5RQL4 147 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 ZNF432O94892 652 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 BCHEP06276 602 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 TFPTP0C1Z6 253 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 PNMTP11086 282 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 CBR1P16152 277 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 ITGA2P17301 1181 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 RPS5P46782 204 aaKnown RBP10.05□□□□□ -0.8
LIG3-207ENST00000586119 MAP2K6P52564 334 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 PRAMEF8Q5VWM4 474 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 PRAMEF7Q5VXH5 474 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 PEX5LQ8IYB4 626 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 SLC38A5Q8WUX1 472 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 CCT8L2Q96SF2 557 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 TPK1Q9H3S4 243 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 NOX3Q9HBY0 568 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 GPR35Q9HC97 309 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 OBP2BQ9NPH6 170 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 B3GAT1Q9P2W7 334 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 TMEFF2Q9UIK5 374 aaPredicted RBP10.05□□□□□ -0.8
LIG3-207ENST00000586119 ZNF443Q9Y2A4 671 aaPredicted RBP10.05□□□□□ -0.8
LIG3-207ENST00000586119 ARL2BPQ9Y2Y0 163 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 DSPPQ9NZW4 1301 aa10.05□□□□□ -0.8
LIG3-207ENST00000586119 IGHV2OR16-5A0A0B4J2B6 119 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 OR6C65A6NJZ3 312 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 IGKV3-15P01624 115 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 ADRA2AP08913 450 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 TACSTD2P09758 323 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 TCN1P20061 433 aaPredicted RBP10.04□□□□□ -0.8
LIG3-207ENST00000586119 NPR2P20594 1047 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 COL8A2P25067 703 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 GIFP27352 417 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 APEX1P27695 318 aaKnown RBP10.04□□□□□ -0.8
LIG3-207ENST00000586119 CRATP43155 626 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 PPOXP50336 477 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 POLR2JP52435 117 aaKnown RBP10.04□□□□□ -0.8
LIG3-207ENST00000586119 CBX1P83916 185 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 NPRL3Q12980 569 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 CCNIQ14094 377 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 GNA13Q14344 377 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 ADRM1Q16186 407 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 CEACAM16Q2WEN9 425 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 LIN52Q52LA3 116 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 GKAP1Q5VSY0 366 aaPredicted RBP10.04□□□□□ -0.8
LIG3-207ENST00000586119 KRT80Q6KB66 452 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 BLOC1S3Q6QNY0 202 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 ABHD12BQ7Z5M8 362 aaPredicted RBP10.04□□□□□ -0.8
LIG3-207ENST00000586119 MDP1Q86V88 176 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 COMTD1Q86VU5 262 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 ZNF440Q8IYI8 595 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 TRIML2Q8N7C3 387 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.04□□□□□ -0.8
LIG3-207ENST00000586119 MAGEE2Q8TD90 523 aaPredicted RBP10.04□□□□□ -0.8
LIG3-207ENST00000586119 VPS33AQ96AX1 596 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 TMEM19Q96HH6 336 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 LINC00470Q9BZP3 86 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 RAB1BQ9H0U4 201 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 PIF1Q9H611 641 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 RMND5AQ9H871 391 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 SAR1AQ9NR31 198 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 RASD1Q9Y272 281 aa10.04□□□□□ -0.8
LIG3-207ENST00000586119 ARHGAP32A7KAX9 2087 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 RFXANKO14593 260 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 WNT9BO14905 357 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 PDE5AO76074 875 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 VENTXO95231 258 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 KRT75O95678 551 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 HLA-DOBP13765 273 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 UQCRBP14927 111 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 HNF1AP20823 631 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 COPZ1P61923 177 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 PIGFQ07326 219 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 RIN1Q13671 783 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 MAPRE2Q15555 327 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 AGKQ53H12 422 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 LIPNQ5VXI9 398 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 CARD17Q5XLA6 110 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 LRP11Q86VZ4 500 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 ZNF786Q8N393 782 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 LINC01356Q8N9X3 169 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms