RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 KRT14P02533 472 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 MT-ND2P03891 347 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 ALOX5P09917 674 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 ERGP11308 486 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 CDH1P12830 882 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 RNH1P13489 461 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 RPL35AP18077 110 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC2A5P22732 501 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 CA6P23280 308 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 PPIBP23284 216 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 CD70P32970 193 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 ID1P41134 155 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 MAGEA3P43357 314 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 HTR5AP47898 357 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 GLIPR1P48060 266 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 MRPL19P49406 292 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 PITX1P78337 314 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 DR1Q01658 176 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 BDH1Q02338 343 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 PJVKQ0ZLH3 352 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 CHIT1Q13231 466 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 GK2Q14410 553 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 HERC3Q15034 1050 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 STK11Q15831 433 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM83EQ2M2I3 478 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 UGT3A2Q3SY77 523 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 GLYR1Q49A26 553 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 DCAF10Q5QP82 559 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 ATP1A1-AS1Q5TC04 95 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 SYPL2Q5VXT5 272 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 LIPJQ5W064 366 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 C5orf46Q6UWT4 87 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 DPY19L4Q7Z388 723 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 PAQR7Q86WK9 346 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 APLFQ8IW19 511 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 PHC2Q8IXK0 858 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 TEX29Q8N6K0 151 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 NT5CQ8TCD5 201 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 AGR3Q8TD06 166 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 GPR148Q8TDV2 347 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 MRPL24Q96A35 216 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 MAGOHBQ96A72 148 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC45A3Q96JT2 553 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 SERPINI1Q99574 410 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 LPAR4Q99677 370 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 RHOJQ9H4E5 214 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 NCOR1P1Q9H4R4 102 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF665Q9H7R5 613 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 WDR41Q9HAD4 459 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 POLE4Q9NR33 117 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 PAQR5Q9NXK6 330 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 NDE1Q9NXR1 346 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 HMGXB4Q9UGU5 601 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 PSORS1C1Q9UIG5 152 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 RARRES3Q9UL19 164 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 NEU3Q9UQ49 428 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 MRPS2Q9Y399 296 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC22A7Q9Y694 548 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 TRBV4-1A0A0J9YWV2 114 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 BTBD17A6NE02 478 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM114B3SHH9 223 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 F8WDY8 70 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 H3BTX0 84 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 I6L893 689 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 J3KR12 359 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 BIRC5O15392 142 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 LCMT2O60294 686 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 SHOX2O60902 331 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 B4GALT2O60909 372 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 LYPLA1O75608 230 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 SRP72O76094 671 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF432O94892 652 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 TOMM40O96008 361 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 ATP1B1P05026 303 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 ANXA5P08758 320 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 ERVK-10P10266 1014 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 ACADVLP49748 655 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF140P52738 457 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 RPS15P62841 145 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 UBE2IP63279 158 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 NTHL1P78549 312 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 DHODHQ02127 395 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 RUNX1T1Q06455 604 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 EIF2B1Q14232 305 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 EFTUD2Q15029 972 aaKnown RBP eCLIP1.69□□□□□ -2.145e-9■■■□□ 15.7
SMCHD1-211ENST00000584897 PYCR3Q53H96 274 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 PTRHD1Q6GMV3 140 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 OR8G2PQ6IF36 304 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 CAPN13Q6MZZ7 669 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 C8orf74Q6P047 294 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 C8orf82Q6P1X6 216 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 ABHD13Q7L211 337 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 PTAR1Q7Z6K3 402 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 PQLC3Q8N755 202 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 TRIML2Q8N7C3 387 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 FADS6Q8N9I5 356 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 DNAAF3Q8N9W5 541 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM178AQ8NBL3 297 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 POC1AQ8NBT0 407 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 OR5L2Q8NGL0 311 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms