RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 CARMIL3Q8ND23 1372 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 A6NDX4 124 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 C12orf77C9JDV5 145 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 PEX7O00628 323 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 FCMRO60667 390 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 PCCAP05165 728 aaPredicted RBP2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 MAGEA8P43361 318 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 RPS10P46783 165 aaKnown RBP2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 GYG1P46976 350 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 CDH4P55283 916 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 KRTAP10-1P60331 282 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 ACTR1AP61163 376 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 CDK16Q00536 496 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 KCTD21Q4G0X4 260 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 PDZK1Q5T2W1 519 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 CENPPQ6IPU0 288 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 CASC1Q6TDU7 716 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNF620Q6ZNG0 422 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 H2BFWTQ7Z2G1 175 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 LINC01551Q86U37 167 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 TMEM135Q86UB9 458 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNF546Q86UE3 836 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 TGIF2LXQ8IUE1 241 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 TBC1D21Q8IYX1 336 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 EIF1ADQ8N9N8 165 aaKnown RBP2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 Q8N9W7 124 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 OR51G1Q8NGK1 321 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 RDH5Q92781 318 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 FAM104AQ969W3 186 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 EXOSC8Q96B26 276 aaKnown RBP2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 TIMD4Q96H15 378 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 IFT74Q96LB3 600 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNF641Q96N77 438 aaPredicted RBP2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 NPY6RQ99463 290 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 ZBTB18Q99592 522 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 KCTD14Q9BQ13 255 aaPredicted RBP2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 NAT9Q9BTE0 207 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 SLC17A9Q9BYT1 436 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 GPR61Q9BZJ8 451 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 ACTR6Q9GZN1 396 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 SRMSQ9H3Y6 488 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 SGK2Q9HBY8 427 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 POLE4Q9NR33 117 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 CCL28Q9NRJ3 127 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 SLC25A37Q9NYZ2 338 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 COX16Q9P0S2 106 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 TMCC3Q9ULS5 477 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 NEU3Q9UQ49 428 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 NPTNQ9Y639 398 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 WSB1Q9Y6I7 421 aa2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNFX1Q9P2E3 1918 aaKnown RBP2.5□□□□□ -2.01
PPP4R1-227ENST00000583988 NACAE9PAV3 2078 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 A0A0U1RQS6 177 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 OR52A4PA6NMU1 304 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 TIMM8AO60220 97 aaPredicted RBP2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 MGRN1O60291 552 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 GIPP09681 153 aaPredicted RBP2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 CCNCP24863 283 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 TFPI2P48307 235 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 ATP1B3P54709 279 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 UBE2HP62256 183 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 UNC119Q13432 240 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 KIAA0087Q14695 138 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 ARHGAP19Q14CB8 494 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNF77Q15935 545 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 IMMTQ16891 758 aaKnown RBP2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 LRRC10Q5BKY1 277 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 C6orf226Q5I0X4 101 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 COA6Q5JTJ3 125 aaKnown RBP2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 PMF1Q6P1K2 205 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 ECHDC2Q86YB7 292 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 PIANPQ8IYJ0 282 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 SAXO1Q8IYX7 474 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNF786Q8N393 782 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 DUSP18Q8NEJ0 188 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 OR4F15Q8NGB8 312 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 OR2G3Q8NGZ4 309 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 STMN2Q93045 179 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 RNF185Q96GF1 192 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 CNN2Q99439 309 aaKnown RBP2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 PELOQ9BRX2 385 aaKnown RBP2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 FAIM2Q9BWQ8 316 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 TM9SF3Q9HD45 589 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNF226Q9NYT6 803 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 CALYQ9NYX4 217 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 XCL2Q9UBD3 114 aa2.49□□□□□ -2.01
PPP4R1-227ENST00000583988 COL4A4P53420 1690 aaPredicted RBP2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 IGLV3-16A0A075B6K0 115 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 A0A1W2PPE3 182 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 H3BNH8 94 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 XKRYO14609 159 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 CXCL11O14625 94 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 UPK3AO75631 287 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 SURF6O75683 361 aaKnown RBP2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 SLC25A27O95847 323 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 MOSP00540 346 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 IL1BP01584 269 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 OPN1MWP04001 364 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 SMIM10L1P0DMW3 83 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms