RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 IFNA8P32881 189 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 TAGLN2P37802 199 aaKnown RBP2.57□□□□□ -2
SMCHD1-209ENST00000583441 VDAC2P45880 294 aaPredicted RBP2.57□□□□□ -2
SMCHD1-209ENST00000583441 CAV2P51636 162 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 SH3BGRP55822 239 aaPredicted RBP2.57□□□□□ -2
SMCHD1-209ENST00000583441 GNB2P62879 340 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 BST1Q10588 318 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 PSG7Q13046 419 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 ARHGAP19Q14CB8 494 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 HERPUD1Q15011 391 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 CCDC183Q5T5S1 534 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 GPR157Q5UAW9 335 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 FAM228AQ86W67 206 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 PSTKQ8IV42 348 aaKnown RBP2.57□□□□□ -2
SMCHD1-209ENST00000583441 PNKDQ8N490 385 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 SPATA4Q8NEY3 305 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 OR10G9Q8NGN4 311 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 FGF14Q92915 247 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 ELSPBP1Q96BH3 223 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 PANX2Q96RD6 677 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 CCDC77Q9BR77 488 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 TMEM246Q9BRR3 403 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 OR11A1Q9GZK7 315 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 ILKAPQ9H0C8 392 aaPredicted RBP2.57□□□□□ -2
SMCHD1-209ENST00000583441 SIAEQ9HAT2 523 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 MMP26Q9NRE1 261 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 QPCTLQ9NXS2 382 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 KLHL28Q9NXS3 571 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 HOXC10Q9NYD6 342 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 SPATA7Q9P0W8 599 aa2.57□□□□□ -2
SMCHD1-209ENST00000583441 MTRF1LQ9UGC7 380 aaKnown RBP2.57□□□□□ -2
SMCHD1-209ENST00000583441 NUFIP1Q9UHK0 495 aaKnown RBP2.57□□□□□ -2
SMCHD1-209ENST00000583441 FOXE1O00358 373 aaPredicted RBP2.56□□□□□ -2
SMCHD1-209ENST00000583441 PSTPIP1O43586 416 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 MGRN1O60291 552 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 FAM189A1O60320 539 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 ERLIN2O94905 339 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 KLF8O95600 359 aaPredicted RBP2.56□□□□□ -2
SMCHD1-209ENST00000583441 UQCRFS1P1P0C7P4 283 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 ZNF853P0CG23 659 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 TNNI1P19237 187 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 TCN1P20061 433 aaPredicted RBP2.56□□□□□ -2
SMCHD1-209ENST00000583441 CASP14P31944 242 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 TPMTP51580 245 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 UGT2B15P54855 530 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 PRPS1P60891 318 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 KCNJ2P63252 427 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 IDI1Q13907 227 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 GK3PQ14409 553 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 GPNMBQ14956 572 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 TMEM107Q6UX40 140 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 ZYG11AQ6WRX3 759 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 IL34Q6ZMJ4 242 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 SLC25A48Q6ZT89 311 aaKnown RBP2.56□□□□□ -2
SMCHD1-209ENST00000583441 SLC22A9Q8IVM8 553 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 CNPY4Q8N129 248 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 C20orf203Q8NBC4 194 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 VN1R2Q8NFZ6 395 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 OR56B2PQ8NGI1 322 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 OR1N2Q8NGR9 330 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 KCNG3Q8TAE7 436 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 FANK1Q8TC84 345 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 FAM151AQ8WW52 585 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 SMARCD2Q92925 531 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 CYYR1Q96J86 154 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 FCRL1Q96LA6 429 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 HSFY1Q96LI6 401 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 MBOAT4Q96T53 435 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 FMO2Q99518 471 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 SORT1Q99523 831 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 NRTNQ99748 197 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 SH3GL1Q99961 368 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 PELOQ9BRX2 385 aaKnown RBP2.56□□□□□ -2
SMCHD1-209ENST00000583441 LY9Q9HBG7 655 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 TM9SF3Q9HD45 589 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 PLSCR3Q9NRY6 295 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 CTNNA3Q9UI47 895 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 CELA1Q9UNI1 258 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 SLC25A15Q9Y619 301 aa2.56□□□□□ -2
SMCHD1-209ENST00000583441 A0A1W2PPV9 198 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 HEATR9A2RTY3 570 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 GJE1A6NN92 205 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 USP27XA6NNY8 438 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 ZNF716A6NP11 495 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 C12orf77C9JDV5 145 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 SLC31A2O15432 143 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 NPIPB7O75200 414 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 UPK3AO75631 287 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 KRT6AP02538 564 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 CRYGBP07316 175 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 ZNF735P0CB33 412 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 CHTF8P0CG12 524 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 DUX4L4P0CJ87 422 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 SLC2A5P22732 501 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 RBMXP38159 391 aaKnown RBP2.55□□□□□ -2
SMCHD1-209ENST00000583441 TNNT2P45379 298 aaPredicted RBP2.55□□□□□ -2
SMCHD1-209ENST00000583441 GSSP48637 474 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 CSNK1DP48730 415 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 PLP1P60201 277 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 TRIM40Q6P9F5 258 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms