RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 OR12D1P0DN82 309 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 SAGP10523 405 aaPredicted RBP10.62□□□□□ -0.71
TOP3A-215ENST00000583328 HOXB1P14653 301 aaPredicted RBP10.62□□□□□ -0.71
TOP3A-215ENST00000583328 TACR3P29371 465 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 CEACAM7Q14002 265 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 OR7A5Q15622 319 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 TMEM225Q6GV28 225 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 TYW3Q6IPR3 259 aaKnown RBP10.62□□□□□ -0.71
TOP3A-215ENST00000583328 BLOC1S3Q6QNY0 202 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 HMGN2P46Q86SG4 172 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 LSRQ86X29 649 aaPredicted RBP10.62□□□□□ -0.71
TOP3A-215ENST00000583328 CLECL1Q8IZS7 167 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 TEX29Q8N6K0 151 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 FAM169BQ8N8A8 192 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 OR51F2Q8NH61 342 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 MAGEE2Q8TD90 523 aaPredicted RBP10.62□□□□□ -0.71
TOP3A-215ENST00000583328 OIT3Q8WWZ8 545 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 ZG16BQ96DA0 208 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 CCDC115Q96NT0 180 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 OR51I1Q9H343 314 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 PIF1Q9H611 641 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 ZNF696Q9H7X3 374 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 EXOSC3Q9NQT5 275 aaKnown RBP10.62□□□□□ -0.71
TOP3A-215ENST00000583328 POLE3Q9NRF9 147 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 TREM2Q9NZC2 230 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 CCDC167Q9P0B6 97 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 CMAHPQ9Y471 501 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 PCDHGB1Q9Y5G3 927 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 IGHV2OR16-5A0A0B4J2B6 119 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 RNF103-CHMP3A0A140T963 221 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 CPSF4O95639 269 aaKnown RBP10.61□□□□□ -0.71
TOP3A-215ENST00000583328 AGR2O95994 175 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 IGKV3-15P01624 115 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 TFP02787 698 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 IGFBP1P08833 259 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-215ENST00000583328 CELA3BP08861 270 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 GAAP10253 952 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 CBR1P16152 277 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 TCN1P20061 433 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-215ENST00000583328 COL8A2P25067 703 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 SELENOPP49908 381 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 MAP2K6P52564 334 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 DAG1Q14118 895 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 AGKQ53H12 422 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 NIPAL3Q6P499 406 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 ANKRD46Q86W74 232 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 CARM1Q86X55 608 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 FUNDC1Q8IVP5 155 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 OR4A15Q8NGL6 344 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 CNOT9Q92600 299 aaKnown RBP10.61□□□□□ -0.71
TOP3A-215ENST00000583328 ROPN1LQ96C74 230 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 SPDL1Q96EA4 605 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 ALKBH3Q96Q83 286 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-215ENST00000583328 ZNF747Q9BV97 191 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 SUCNR1Q9BXA5 334 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 RMND5AQ9H871 391 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 SAR1AQ9NR31 198 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 REV1Q9UBZ9 1251 aa10.61□□□□□ -0.71
TOP3A-215ENST00000583328 LOC105371242A0A075B767 164 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 TRAV20A0A0B4J274 112 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 CCDC154A6NI56 674 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 LIPT2A6NK58 231 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 AQP7P3A6NL99 342 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 AP3D1O14617 1153 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 SLC22A2O15244 555 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 CCDC22O60826 627 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 UPK3AO75631 287 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 FAM107AO95990 144 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 BCL10O95999 233 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 PNPP00491 289 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 GUSBP08236 651 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 ROR2Q01974 943 aaKnown RBP10.6□□□□□ -0.71
TOP3A-215ENST00000583328 NPRL3Q12980 569 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 SNTB2Q13425 540 aaKnown RBP10.6□□□□□ -0.71
TOP3A-215ENST00000583328 GPAT3Q53EU6 434 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 ZNF311Q5JNZ3 666 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 ELFN2Q5R3F8 820 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 AP1ARQ63HQ0 302 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 KRT80Q6KB66 452 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 TNFAIP8L2Q6P589 184 aaPredicted RBP10.6□□□□□ -0.71
TOP3A-215ENST00000583328 SHISA2Q6UWI4 295 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 FRRS1Q6ZNA5 592 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 LINGO2Q7L985 606 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 PIGWQ7Z7B1 504 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 MYPOPQ86VE0 399 aaPredicted RBP10.6□□□□□ -0.71
TOP3A-215ENST00000583328 IL17RDQ8NFM7 739 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 TSPEARQ8WU66 669 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 RDH5Q92781 318 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 RAB8BQ92930 207 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 VPS33AQ96AX1 596 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 ITCHQ96J02 903 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 PANX1Q96RD7 426 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 CCT8L2Q96SF2 557 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 TAPBPLQ9BX59 468 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 CRLF2Q9HC73 371 aa10.6□□□□□ -0.71
TOP3A-215ENST00000583328 RFXANKO14593 260 aa10.59□□□□□ -0.71
TOP3A-215ENST00000583328 WNT9BO14905 357 aa10.59□□□□□ -0.71
TOP3A-215ENST00000583328 PPIHO43447 177 aaKnown RBP10.59□□□□□ -0.71
TOP3A-215ENST00000583328 SYNGR3O43761 229 aa10.59□□□□□ -0.71
TOP3A-215ENST00000583328 HPXP02790 462 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms