RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 CCL28Q9NRJ3 127 aa3.64□□□□□ -1.83
SMARCE1-219ENST00000583294 CLCF1Q9UBD9 225 aa3.64□□□□□ -1.83
SMARCE1-219ENST00000583294 TRBV6-6A0A0A6YYG2 114 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 FAM166BA8MTA8 275 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 MPHOSPH10O00566 681 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 CXCL11O14625 94 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 CMA1P23946 247 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 CD1CP29017 333 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 CSNK1DP48730 415 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 LHX2P50458 406 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 GPNMBQ14956 572 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 LRRC10Q5BKY1 277 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 FAM43BQ6ZT52 329 aaPredicted RBP3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 COX15Q7KZN9 410 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 ZNF429Q86V71 674 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 BLOC1S5Q8TDH9 187 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 ACOT11Q8WXI4 607 aaPredicted RBP3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 RNF185Q96GF1 192 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 MS4A4EQ96PG1 132 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 NPY6RQ99463 290 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 RIOK1Q9BRS2 568 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 RIOK2Q9BVS4 552 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 ROPN1BQ9BZX4 212 aaPredicted RBP3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 AZI2Q9H6S1 392 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 LY9Q9HBG7 655 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 DEC1Q9P2X7 70 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 NUFIP1Q9UHK0 495 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 TRAPPC4Q9Y296 219 aa3.63□□□□□ -1.83
SMARCE1-219ENST00000583294 PDS5BQ9NTI5 1447 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 A0A1W2PNU3 283 aaPredicted RBP3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 ARHGEF35A5YM69 484 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 C12orf71A8MTZ7 269 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 HAS3O00219 553 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 CRISP2P16562 243 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 CALRP27797 417 aaKnown RBP3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 SSR1P43307 286 aaKnown RBP3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 CCR6P51684 374 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 UCNP55089 124 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 MECOMQ03112 1051 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 MRPL28Q13084 256 aaKnown RBP3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 PSG5Q15238 335 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 PHYHD1Q5SRE7 291 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 FRMPD2BQ6IN97 320 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 LCN12Q6JVE5 192 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 LRRC31Q6UY01 552 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 ZNF621Q6ZSS3 439 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 PIANPQ8IYJ0 282 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 SDR9C7Q8NEX9 313 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 SDHCQ99643 169 aaPredicted RBP3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 HDHD3Q9BSH5 251 aaPredicted RBP3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 CHRDL1Q9BU40 450 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 HYPKQ9NX55 129 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 CALYQ9NYX4 217 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 SLC25A37Q9NYZ2 338 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 EXTL2Q9UBQ6 330 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 HEBP2Q9Y5Z4 205 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 NACAE9PAV3 2078 aa3.62□□□□□ -1.83
SMARCE1-219ENST00000583294 OR7A10O76100 309 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 GAPDHP04406 335 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 ALDOBP05062 364 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 PCCAP05165 728 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 UBTFL1P0CB47 393 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 ETS2P15036 469 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 CNIH2Q6PI25 160 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 ENTHD1Q8IYW4 607 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 TPRX1Q8N7U7 411 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 CCDC54Q8NEL0 328 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 TRPV1Q8NER1 839 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 NPBQ8NG41 125 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 OR1L6Q8NGR2 347 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 OR6X1Q8NH79 312 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 FGF14Q92915 247 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 SMARCD2Q92925 531 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 PLEKHA8Q96JA3 519 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 C12orf42Q96LP6 360 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 CNN2Q99439 309 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 SLC25A39Q9BZJ4 359 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 DEFB127Q9H1M4 99 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 ANKRD19PQ9H560 264 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 ADAP2Q9NPF8 381 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 GLRX2Q9NS18 164 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 ZNF639Q9UID6 485 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 ZNF223Q9UK11 482 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 NPTNQ9Y639 398 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 WSB1Q9Y6I7 421 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 FANCIQ9NVI1 1328 aa3.61□□□□□ -1.83
SMARCE1-219ENST00000583294 MTCL1Q9Y4B5 1905 aaKnown RBP3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 CCDC182A6NF36 153 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 OR52A4PA6NMU1 304 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 ATP1B2P14415 290 aaPredicted RBP3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 HPGDP15428 266 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 TAGLN2P37802 199 aaKnown RBP3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 SLC26A3P40879 764 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 EPS15P42566 896 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 ERVK-25P63136 954 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 GNMTQ14749 295 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 DGUOKQ16854 277 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 CEP55Q53EZ4 464 aa3.6□□□□□ -1.83
SMARCE1-219ENST00000583294 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms