RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SERPINA3P01011 423 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 TFP02787 698 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 NAA10P41227 235 aaPredicted RBP20.53■□□□□ 0.88
CCDC47-204ENST00000582252 CDKN2AP42771 156 aaKnown RBP20.53■□□□□ 0.88
CCDC47-204ENST00000582252 OR12D2P58182 307 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 DEFA1P59665 94 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 DEFA3P59666 94 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 SGCBQ16585 318 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 CDONQ4KMG0 1287 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 MZT2AQ6P582 158 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 RAB11FIP2Q7L804 512 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 SNX29P2Q8IUI4 249 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 OR51L1Q8NGJ5 315 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 OR2T4Q8NH00 348 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 OR5J2Q8NH18 312 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 OR6S1Q8NH40 331 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 ALG12Q9BV10 488 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 SP140LQ9H930 580 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 RPRD1BQ9NQG5 326 aaKnown RBP20.53■□□□□ 0.88
CCDC47-204ENST00000582252 SLC39A1Q9NY26 324 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 ZMIZ1Q9ULJ6 1067 aa20.53■□□□□ 0.88
CCDC47-204ENST00000582252 DMXL1Q9Y485 3027 aa20.52■□□□□ 0.88
CCDC47-204ENST00000582252 TMEM72A0PK05 275 aa20.52■□□□□ 0.88
CCDC47-204ENST00000582252 TRIM3O75382 744 aaPredicted RBP20.52■□□□□ 0.88
CCDC47-204ENST00000582252 F13BP05160 661 aa20.52■□□□□ 0.88
CCDC47-204ENST00000582252 CSRP1P21291 193 aaKnown RBP20.52■□□□□ 0.88
CCDC47-204ENST00000582252 MSX1P28360 303 aa20.52■□□□□ 0.88
CCDC47-204ENST00000582252 EIF3IQ13347 325 aaKnown RBP20.52■□□□□ 0.88
CCDC47-204ENST00000582252 HES3Q5TGS1 186 aa20.52■□□□□ 0.88
CCDC47-204ENST00000582252 C1orf140Q5VVS0 124 aa20.52■□□□□ 0.88
CCDC47-204ENST00000582252 LCN10Q6JVE6 187 aa20.52■□□□□ 0.88
CCDC47-204ENST00000582252 PAMR1Q6UXH9 720 aa20.52■□□□□ 0.88
CCDC47-204ENST00000582252 ADGRG3Q86Y34 549 aa20.52■□□□□ 0.88
CCDC47-204ENST00000582252 ASB15Q8WXK1 588 aa20.52■□□□□ 0.88
CCDC47-204ENST00000582252 THAP4Q8WY91 577 aa20.52■□□□□ 0.88
CCDC47-204ENST00000582252 MYOTQ9UBF9 498 aa20.52■□□□□ 0.88
CCDC47-204ENST00000582252 NPIPB7O75200 414 aa20.51■□□□□ 0.87
CCDC47-204ENST00000582252 PYCR1P32322 319 aa20.51■□□□□ 0.87
CCDC47-204ENST00000582252 PPP3R1P63098 170 aa20.51■□□□□ 0.87
CCDC47-204ENST00000582252 NHLH1Q02575 133 aa20.51■□□□□ 0.87
CCDC47-204ENST00000582252 DMKNQ6E0U4 476 aaPredicted RBP20.51■□□□□ 0.87
CCDC47-204ENST00000582252 TMEM91Q6ZNR0 172 aa20.51■□□□□ 0.87
CCDC47-204ENST00000582252 C16orf47Q6ZP98 133 aaPredicted RBP20.51■□□□□ 0.87
CCDC47-204ENST00000582252 EGFL6Q8IUX8 553 aa20.51■□□□□ 0.87
CCDC47-204ENST00000582252 HAVCR2Q8TDQ0 301 aa20.51■□□□□ 0.87
CCDC47-204ENST00000582252 RNF138Q8WVD3 245 aa20.51■□□□□ 0.87
CCDC47-204ENST00000582252 MR1Q95460 341 aa20.51■□□□□ 0.87
CCDC47-204ENST00000582252 TSPAN32Q96QS1 320 aa20.51■□□□□ 0.87
CCDC47-204ENST00000582252 DEFB126Q9BYW3 111 aa20.51■□□□□ 0.87
CCDC47-204ENST00000582252 INIPQ9NRY2 104 aa20.51■□□□□ 0.87
CCDC47-204ENST00000582252 SIRT4Q9Y6E7 314 aaPredicted RBP20.51■□□□□ 0.87
CCDC47-204ENST00000582252 TMEM200CA6NKL6 621 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 XKRYO14609 159 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 DKK1O94907 266 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 OR6A2O95222 327 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 CD1AP06126 327 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 MYL9P24844 172 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 APOBEC1P41238 236 aaKnown RBP20.5■□□□□ 0.87
CCDC47-204ENST00000582252 SLC3A1Q07837 685 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 MFSD13AQ14CX5 517 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 CCDC58Q4VC31 144 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 STEAP3Q658P3 488 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 SLC16A9Q7RTY1 509 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 LAX1Q8IWV1 398 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 ZPLD1Q8TCW7 415 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 C8orf44Q96CB5 159 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 SLC25A36Q96CQ1 311 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 SNX18Q96RF0 628 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 MNTQ99583 582 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 ZPBPQ9BS86 351 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 PTDSS2Q9BVG9 487 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 KLRF1Q9NZS2 232 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 LOC102723996A0A087X1L8 192 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 CCDC187A0A096LP49 1063 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 C17orf51A8MQB3 221 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 ADAM10O14672 748 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 OGG1O15527 345 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 FTH1P19P0C7X4 201 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 DLX5P56178 289 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 DCAF12Q5T6F0 453 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 RPL22L1Q6P5R6 122 aaKnown RBP20.5■□□□□ 0.87
CCDC47-204ENST00000582252 SSX6Q7RTT6 188 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 SLC22A16Q86VW1 577 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 GHDCQ8N2G8 530 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 EXD3Q8N9H8 876 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 ACOT12Q8WYK0 555 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 ABCB9Q9NP78 766 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 ADAM30Q9UKF2 790 aa20.5■□□□□ 0.87
CCDC47-204ENST00000582252 ZNF346Q9UL40 294 aaKnown RBP20.5■□□□□ 0.87
CCDC47-204ENST00000582252 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.49■□□□□ 0.87
CCDC47-204ENST00000582252 SELENOFO60613 162 aa20.49■□□□□ 0.87
CCDC47-204ENST00000582252 PTTG1O95997 202 aa20.49■□□□□ 0.87
CCDC47-204ENST00000582252 CD63P08962 238 aa20.49■□□□□ 0.87
CCDC47-204ENST00000582252 JMJD7P0C870 316 aa20.49■□□□□ 0.87
CCDC47-204ENST00000582252 GTF2E2P29084 291 aaKnown RBP20.49■□□□□ 0.87
CCDC47-204ENST00000582252 MAP2K6P52564 334 aa20.49■□□□□ 0.87
CCDC47-204ENST00000582252 CLDN6P56747 220 aa20.49■□□□□ 0.87
CCDC47-204ENST00000582252 TP53I3Q53FA7 332 aa20.49■□□□□ 0.87
CCDC47-204ENST00000582252 MESTQ5EB52 335 aa20.49■□□□□ 0.87
CCDC47-204ENST00000582252 LINC01590Q5TEZ4 76 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms