RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 RPL13AP3Q6NVV1 102 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 C19orf48Q6RUI8 117 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 KLHL17Q6TDP4 642 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 OAFQ86UD1 273 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 GGNQ86UU5 652 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 P3H2Q8IVL5 708 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 GALNT4Q8N4A0 578 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 LSM14AQ8ND56 463 aaKnown RBP7.18□□□□□ -1.26
COPS3-215ENST00000578317 ABTB1Q969K4 478 aaPredicted RBP7.18□□□□□ -1.26
COPS3-215ENST00000578317 KLHL15Q96M94 604 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 TIMP4Q99727 224 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 GABARAPL3Q9BY60 117 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 OR11A1Q9GZK7 315 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 DEFB127Q9H1M4 99 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 NANSQ9NR45 359 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 KRT84Q9NSB2 600 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 PAQR5Q9NXK6 330 aaPredicted RBP7.18□□□□□ -1.26
COPS3-215ENST00000578317 SMPD3Q9NY59 655 aaPredicted RBP7.18□□□□□ -1.26
COPS3-215ENST00000578317 MRPL39Q9NYK5 338 aaKnown RBP7.18□□□□□ -1.26
COPS3-215ENST00000578317 KIF17Q9P2E2 1029 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 SIGLEC7Q9Y286 467 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 B3GALT5Q9Y2C3 310 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 ORC6Q9Y5N6 252 aa7.18□□□□□ -1.26
COPS3-215ENST00000578317 A0A0J9YW62 118 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 UNC119BA6NIH7 251 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 H0YAE9 185 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 H3BML4 177 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 KPNA4O00629 521 aaPredicted RBP7.17□□□□□ -1.26
COPS3-215ENST00000578317 PIP5K1CO60331 668 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 HIST1H2ABP04908 130 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 SAGP10523 405 aaPredicted RBP7.17□□□□□ -1.26
COPS3-215ENST00000578317 TFPIP10646 304 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 ZNF708P17019 499 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 GPR4P46093 362 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 HSPA13P48723 471 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 MECP2P51608 486 aaKnown RBP7.17□□□□□ -1.26
COPS3-215ENST00000578317 CLDN15P56746 228 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 CLDN18P56856 261 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 CLDN20P56880 219 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 NUP107P57740 925 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 PRPS1P60891 318 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 SLC35A1P78382 337 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 FAPQ12884 760 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 NPRL3Q12980 569 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 TAF11Q15544 211 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 CTU2Q2VPK5 515 aaKnown RBP7.17□□□□□ -1.26
COPS3-215ENST00000578317 ZBED5Q49AG3 693 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 PDSS1Q5T2R2 415 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 ARHGAP11AQ6P4F7 1023 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 PAQR6Q6TCH4 344 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 PCSK4Q6UW60 755 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 H1FNTQ75WM6 255 aaPredicted RBP7.17□□□□□ -1.26
COPS3-215ENST00000578317 HIST3H2AQ7L7L0 130 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 LRRC17Q8N6Y2 441 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 ADPRHL1Q8NDY3 354 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 FAR1Q8WVX9 515 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 OSTF1Q92882 214 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 HIST1H2ACQ93077 130 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 FBXW5Q969U6 566 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 MOGAT1Q96PD6 335 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 TNFRSF13CQ96RJ3 184 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 TAPBPLQ9BX59 468 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 SLC6A15Q9H2J7 730 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 LDAHQ9H6V9 325 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 EMC7Q9NPA0 242 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 TIGARQ9NQ88 270 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 AP5S1Q9NUS5 200 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 ALKBH4Q9NXW9 302 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 SLC6A5Q9Y345 797 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 LRRC42Q9Y546 428 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 KALRNO60229 2985 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 NINQ8N4C6 2090 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 EXPH5Q8NEV8 1989 aa7.17□□□□□ -1.26
COPS3-215ENST00000578317 LRRN3E7EW58 273 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 NPIPA5E9PKD4 350 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 SULT2B1O00204 365 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 PLPP3O14495 311 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 VAMP5O95183 116 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 SNAP29O95721 258 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 APEHP13798 732 aaKnown RBP7.16□□□□□ -1.26
COPS3-215ENST00000578317 TCEA1P23193 301 aaKnown RBP7.16□□□□□ -1.26
COPS3-215ENST00000578317 SHC1P29353 583 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 GRPRP30550 384 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 UQCRC1P31930 480 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 SFTPDP35247 375 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 STARP49675 285 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 DIO1P49895 249 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 RPS6KA3P51812 740 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 SUCLG1P53597 346 aaKnown RBP7.16□□□□□ -1.26
COPS3-215ENST00000578317 CRISP1P54107 249 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 CARD18P57730 90 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 CDK5Q00535 292 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 SGCBQ16585 318 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 TTC23Q5W5X9 447 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 SMARCD3Q6STE5 483 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 FAM180AQ6UWF9 173 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 ZNF620Q6ZNG0 422 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 THAP5Q7Z6K1 395 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 PM20D2Q8IYS1 436 aa7.16□□□□□ -1.26
COPS3-215ENST00000578317 ATP6V1C2Q8NEY4 427 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms