RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, human

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC57-211	ENST00000578187		H7C1Q1	480 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	HS3ST1	O14792	307 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	SMAD7	O15105	426 aa	Known RBP	11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	KLF4	O43474	513 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	MRPL33	O75394	65 aa	Known RBP	11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	ZNF682	O95780	498 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	MT-ATP6	P00846	226 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	IFNW1	P05000	195 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	THBD	P07204	575 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	T-ENOL	P0DO92	83 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	PTN	P21246	168 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	GRPR	P30550	384 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	RBM34	P42696	430 aa	Known RBP	11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	MXRA7	P84157	204 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	PIN1	Q13526	163 aa	Predicted RBP	11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	SFRP5	Q5T4F7	317 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	FBXW9	Q5XUX1	488 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	TMEM225	Q6GV28	225 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	GLYAT	Q6IB77	296 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	TTC33	Q6PID6	262 aa	Predicted RBP	11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	CASP12	Q6UXS9	341 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	CREB3L2	Q70SY1	520 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	SSX8	Q7RTT4	187 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	GPAT4	Q86UL3	456 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	EPHX4	Q8IUS5	362 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	ZNF100	Q8IYN0	542 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	OFCC1	Q8IZS5	231 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	ZNF611	Q8N823	705 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	RBM15B	Q8NDT2	890 aa	Known RBP	11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	S100PBP	Q96BU1	408 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	ZNF385A	Q96PM9	386 aa	Known RBP	11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	CDRT15	Q96T59	188 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	AMBRA1	Q9C0C7	1298 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	GORASP2	Q9H8Y8	452 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	MRPL39	Q9NYK5	338 aa	Known RBP	11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	MAGEL2	Q9UJ55	1249 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	RIMS3	Q9UJD0	308 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	RPS6KA6	Q9UK32	745 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	A4GNT	Q9UNA3	340 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	ABCA4	P78363	2273 aa		11.26	□□□□□ -0.61
CCDC57-211	ENST00000578187	AKAP6	Q13023	2319 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	MAP1A	P78559	2803 aa	Predicted RBP	11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	LOC102725191	A0A1B0GVB3	256 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187		B2RBV5	119 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	PDLIM1	O00151	329 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	ADA	P00813	363 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	IGF2	P01344	180 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	CD3E	P07766	207 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	IGHV1-2	P23083	117 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	LOX	P28300	417 aa	Predicted RBP	11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	RPS4X	P62701	263 aa	Known RBP	11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	PPP2R2B	Q00005	443 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	ITGAD	Q13349	1161 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	ZNF74	Q16587	644 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	C22orf34	Q6ZV56	151 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	H1FNT	Q75WM6	255 aa	Predicted RBP	11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	TRPM8	Q7Z2W7	1104 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	NKAIN4	Q8IVV8	208 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	TRMT61A	Q96FX7	289 aa	Known RBP	11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	OXGR1	Q96P68	337 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	ASPN	Q9BXN1	380 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	FKRP	Q9H9S5	495 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	MEPE	Q9NQ76	525 aa	Predicted RBP	11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	DCAF13	Q9NV06	445 aa	Known RBP	11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	PARPBP	Q9NWS1	579 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	SAMD4A	Q9UPU9	718 aa	Known RBP	11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	RNF115	Q9Y4L5	304 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	SNX13	Q9Y5W8	968 aa		11.25	□□□□□ -0.61
CCDC57-211	ENST00000578187	LRRN3	E7EW58	273 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	ARPC2	O15144	300 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	CLOCK	O15516	846 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	TRAF3IP2	O43734	574 aa	Predicted RBP	11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	PRSS23	O95084	383 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	IGHV3-9	P01782	118 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	PAX1	P15863	534 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	TCN1	P20061	433 aa	Predicted RBP	11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	CBL	P22681	906 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	UGT2B15	P54855	530 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	ATP5J2	P56134	94 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	ST3GAL3	Q11203	375 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	RINL	Q6ZS11	566 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	AAED1	Q7RTV5	226 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	SLC46A3	Q7Z3Q1	461 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	TSEN54	Q7Z6J9	526 aa	Known RBP	11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	ARHGAP24	Q8N264	748 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	KDM8	Q8N371	416 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	FAM86B1	Q8N7N1	296 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	TMEM255B	Q8WV15	326 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	FBXW5	Q969U6	566 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	GTPBP3	Q969Y2	492 aa	Known RBP	11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	MUCL1	Q96DR8	90 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	SLCO5A1	Q9H2Y9	848 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	SLC7A10	Q9NS82	523 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	MAN2C1	Q9NTJ4	1040 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	RCE1	Q9Y256	329 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	ENPP4	Q9Y6X5	453 aa		11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.24	□□□□□ -0.61
CCDC57-211	ENST00000578187	PRR14L	Q5THK1	2151 aa		11.23	□□□□□ -0.61

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