RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 TMEM106AQ96A25 262 aa12.51□□□□□ -0.41
NDEL1-204ENST00000578172 KCTD12Q96CX2 325 aaKnown RBP12.51□□□□□ -0.41
NDEL1-204ENST00000578172 SLC22A13Q9Y226 551 aa12.51□□□□□ -0.41
NDEL1-204ENST00000578172 CFAP54Q96N23 3096 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 ZNF879B4DU55 563 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 CBX7O95931 251 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 RNH1P13489 461 aaKnown RBP12.5□□□□□ -0.41
NDEL1-204ENST00000578172 ZNF250P15622 560 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 SRMP19623 302 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 MNDAP41218 407 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 PSG6Q00889 435 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 YIF1BQ5BJH7 314 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 FAM219AQ8IW50 185 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 PM20D2Q8IYS1 436 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 METTL21AQ8WXB1 218 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 ATOH1Q92858 354 aaPredicted RBP12.5□□□□□ -0.41
NDEL1-204ENST00000578172 KLHDC3Q9BQ90 382 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 TBL1XR1Q9BZK7 514 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 WDR76Q9H967 626 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 MCCC2Q9HCC0 563 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 CYSLTR2Q9NS75 346 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 KCNN3Q9UGI6 736 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 H3BML4 177 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 PLRG1O43660 514 aaKnown RBP12.5□□□□□ -0.41
NDEL1-204ENST00000578172 ZFPL1O95159 310 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 C1QBP02746 253 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 S100A6P06703 90 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 EPXP11678 715 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 FCARP24071 287 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 HLA-DMAP28067 261 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 IL12BP29460 328 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 MLC1Q15049 377 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 CLPPQ16740 277 aaPredicted RBP12.5□□□□□ -0.41
NDEL1-204ENST00000578172 DUSP6Q16828 381 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 VWA2Q5GFL6 755 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 CD300LDQ6UXZ3 194 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 NHLRC1Q6VVB1 395 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 MDGA2Q7Z553 956 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 GRAMD2AQ8IUY3 354 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 CASTOR1Q8WTX7 329 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 FCAMRQ8WWV6 532 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 C5orf34Q96MH7 638 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 DPYSL5Q9BPU6 564 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 OR11A1Q9GZK7 315 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 ATG5Q9H1Y0 275 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 CD207Q9UJ71 328 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 A0A0J9YY10 115 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 GALR3O60755 368 aaPredicted RBP12.5□□□□□ -0.41
NDEL1-204ENST00000578172 SPI1P17947 270 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 KIAA1024LP59773 190 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 B3GNTL1Q67FW5 361 aaPredicted RBP12.5□□□□□ -0.41
NDEL1-204ENST00000578172 OLFML2AQ68BL7 652 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 LINC00346Q8IVM7 164 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 MS4A15Q8N5U1 240 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 MNTQ99583 582 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 NPAP1Q9NZP6 1156 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 CGGBP1Q9UFW8 167 aaPredicted RBP12.5□□□□□ -0.41
NDEL1-204ENST00000578172 KLHL21Q9UJP4 597 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 FREM3P0C091 2139 aa12.5□□□□□ -0.41
NDEL1-204ENST00000578172 CEP250Q9BV73 2442 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 A0A1B0GVI7 797 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 DCTN6O00399 190 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 ITGA10O75578 1167 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 SPDEFO95238 335 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 SELENOPP49908 381 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 NRG3P56975 720 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 GMFBP60983 142 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 PRICKLE4Q2TBC4 344 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 ULK3Q6PHR2 472 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 Q6ZTK2 550 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 OR5AK2Q8NH90 309 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 ACOT12Q8WYK0 555 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 CRISPLD2Q9H0B8 497 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 BRINP1O60477 761 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 KRT33AO76009 404 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 TACR3P29371 465 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 KIR2DL1P43626 348 aaPredicted RBP12.49□□□□□ -0.41
NDEL1-204ENST00000578172 SPOCK1Q08629 439 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 UBXN2BQ14CS0 331 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 MARCH3Q86UD3 253 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 CMKLR1Q99788 373 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 OR10A5Q9H207 317 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 NOX3Q9HBY0 568 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 C14orf105Q9NVL8 296 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 MN1Q10571 1320 aaPredicted RBP12.49□□□□□ -0.41
NDEL1-204ENST00000578172 A0A1W2PQF6 199 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 TBX19O60806 448 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 SERPINA3P01011 423 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 RPS15P62841 145 aaKnown RBP12.49□□□□□ -0.41
NDEL1-204ENST00000578172 PLA2G7Q13093 441 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 CDK5R1Q15078 307 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 HEPHL1Q6MZM0 1159 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 CORO6Q6QEF8 472 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 KLHDC7BQ96G42 594 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 RANBP3Q9H6Z4 567 aaPredicted RBP12.49□□□□□ -0.41
NDEL1-204ENST00000578172 EXO5Q9H790 373 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 COMMD9Q9P000 198 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 V9GY05 133 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 GPR179Q6PRD1 2367 aa12.49□□□□□ -0.41
NDEL1-204ENST00000578172 ZNF593O00488 134 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms