RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 FBXW9Q5XUX1 488 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 CASP12Q6UXS9 341 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 ZNF730Q6ZMV8 503 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 Q6ZT83 130 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 CREB3L2Q70SY1 520 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 AAED1Q7RTV5 226 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 ABHD12BQ7Z5M8 362 aaPredicted RBP9.77□□□□□ -0.85
CHD3-216ENST00000573936 ZDHHC21Q8IVQ6 265 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 UEVLDQ8IX04 471 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 AQP12AQ8IXF9 295 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 ZNF295-AS1Q8N0V1 137 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 FAM222BQ8WU58 562 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 LIPHQ8WWY8 451 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 ACOT11Q8WXI4 607 aaPredicted RBP9.77□□□□□ -0.85
CHD3-216ENST00000573936 MOGAT1Q96PD6 335 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 RAB3IPQ96QF0 476 aaPredicted RBP9.77□□□□□ -0.85
CHD3-216ENST00000573936 PIP5K1AQ99755 562 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 MAGIXQ9H6Y5 334 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 NMNAT1Q9HAN9 279 aaPredicted RBP9.77□□□□□ -0.85
CHD3-216ENST00000573936 KRCC1Q9NPI7 259 aaPredicted RBP9.77□□□□□ -0.85
CHD3-216ENST00000573936 MEPEQ9NQ76 525 aaPredicted RBP9.77□□□□□ -0.85
CHD3-216ENST00000573936 RHCGQ9UBD6 479 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 UPB1Q9UBR1 384 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 POMPQ9Y244 141 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 NOX1Q9Y5S8 564 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 INTS1Q8N201 2190 aaKnown RBP9.76□□□□□ -0.85
CHD3-216ENST00000573936 TCRBV5S2A0A599 114 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 MS4A18H0YCH9 400 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 hCG_2039718K7EN88 272 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 ADAP00813 363 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 ASAH2BP0C7U1 165 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 ADORA3P0DMS8 318 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 FUT1P19526 365 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 PSMB1P20618 241 aaKnown RBP9.76□□□□□ -0.85
CHD3-216ENST00000573936 AHCYP23526 432 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 UGT2B10P36537 528 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 KRTAP10-9P60411 292 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 VLDLRP98155 873 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 TLE4Q04727 773 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 PRKCDQ05655 676 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 FOXD4Q12950 439 aaPredicted RBP9.76□□□□□ -0.85
CHD3-216ENST00000573936 MS4A18Q3C1V0 323 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 MBOAT2Q6ZWT7 520 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 PIWIL3Q7Z3Z3 882 aaKnown RBP9.76□□□□□ -0.85
CHD3-216ENST00000573936 TSEN54Q7Z6J9 526 aaKnown RBP9.76□□□□□ -0.85
CHD3-216ENST00000573936 PXKQ7Z7A4 578 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 UBE2J2Q8N2K1 259 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 FAM86B1Q8N7N1 296 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 ZIC4Q8N9L1 334 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 POMGNT2Q8NAT1 580 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 STEAP2Q8NFT2 490 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 PFN4Q8NHR9 129 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 C14orf79Q96F83 325 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 DACH2Q96NX9 599 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 MCCC2Q9HCC0 563 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 MAN2C1Q9NTJ4 1040 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 RCE1Q9Y256 329 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 TMEM5Q9Y2B1 443 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 MED13LQ71F56 2210 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 MED12LQ86YW9 2145 aa9.76□□□□□ -0.85
CHD3-216ENST00000573936 A0A087WUU8 490 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 SH3D21A4FU49 640 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 LRRN3E7EW58 273 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 CASKO14936 926 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 RNF13O43567 381 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 CIB2O75838 187 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 KRT33AO76009 404 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 KRT36O76013 467 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 GOSR1O95249 250 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 GADD45GO95257 159 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 EPXP11678 715 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 IFI30P13284 250 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 SLC9A3P48764 834 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 CLDN17P56750 224 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 SPIBQ01892 262 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 ITGADQ13349 1161 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 ANKDD1AQ495B1 522 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 IQCCQ4KMZ1 466 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 FGD3Q5JSP0 725 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 SFRP5Q5T4F7 317 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 NIPAL3Q6P499 406 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 STAC2Q6ZMT1 411 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 SLC46A3Q7Z3Q1 461 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 NANOGNBQ7Z5D8 188 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 CXorf67Q86X51 503 aaPredicted RBP9.75□□□□□ -0.85
CHD3-216ENST00000573936 EPHX4Q8IUS5 362 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 GABRG1Q8N1C3 465 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 KDM8Q8N371 416 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 ANKK1Q8NFD2 765 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 KISS1RQ969F8 398 aaPredicted RBP9.75□□□□□ -0.85
CHD3-216ENST00000573936 BPIFA2Q96DR5 249 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 DHRS1Q96LJ7 313 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 ZNF385AQ96PM9 386 aaKnown RBP9.75□□□□□ -0.85
CHD3-216ENST00000573936 SEPHS2Q99611 448 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 SLCO5A1Q9H2Y9 848 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 C20orf141Q9NUB4 165 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 ASB6Q9NWX5 421 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 B3GAT1Q9P2W7 334 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 SEC14L4Q9UDX3 406 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 PRSS50Q9UI38 385 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms