RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 SCARB2Q14108 478 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 ADRM1Q16186 407 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 GABRA6Q16445 453 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 TSPO2Q5TGU0 170 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 C1orf140Q5VVS0 124 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 OR7E24Q6IFN5 339 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 ADAM5Q6NVV9 412 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 DHRS4L2Q6PKH6 230 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 PRSS57Q6UWY2 283 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 CASP12Q6UXS9 341 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 GPAT4Q86UL3 456 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 DPP10Q8N608 796 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 LSMEM1Q8N8F7 131 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 ZIC4Q8N9L1 334 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 HIPK4Q8NE63 616 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 BHLHE22Q8NFJ8 381 aaPredicted RBP6.54□□□□□ -1.36
NUP88-205ENST00000572809 OR52E4Q8NGH9 312 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 MFSD8Q8NHS3 518 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 TMEM171Q8WVE6 324 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 FBXW5Q969U6 566 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 SLC25A36Q96CQ1 311 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 ANKRD27Q96NW4 1050 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 MUS81Q96NY9 551 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 CGREF1Q99674 301 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 TRIM2Q9C040 744 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 ZNF385DQ9H6B1 395 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 C12orf10Q9HB07 376 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 SLC7A10Q9NS82 523 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 ADPRHL2Q9NX46 363 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 TAS2R16Q9NYV7 291 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 ZNF281Q9Y2X9 895 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 RNF115Q9Y4L5 304 aa6.54□□□□□ -1.36
NUP88-205ENST00000572809 M0QX08 132 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 OR2T1O43869 369 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 TMCC2O75069 709 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 MFN2O95140 757 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 AHSA1O95433 338 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 TROVE2P10155 538 aaKnown RBP eCLIP6.53□□□□□ -1.36
NUP88-205ENST00000572809 PNMTP11086 282 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 AQP1P29972 269 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 RPS5P46782 204 aaKnown RBP6.53□□□□□ -1.36
NUP88-205ENST00000572809 P2RY4P51582 365 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 ARFIP2P53365 341 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 FOXG1P55316 489 aaPredicted RBP6.53□□□□□ -1.36
NUP88-205ENST00000572809 RIPPLY3P57055 190 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 TGFBR3Q03167 851 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 EGR4Q05215 589 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 RBBP4Q09028 425 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 NFYCQ13952 458 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 CYLC2Q14093 348 aaPredicted RBP6.53□□□□□ -1.36
NUP88-205ENST00000572809 ZNF672Q499Z4 452 aaPredicted RBP6.53□□□□□ -1.36
NUP88-205ENST00000572809 GLIPR1L2Q4G1C9 344 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 LCE5AQ5TCM9 118 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 C9orf135Q5VTT2 229 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 ULK3Q6PHR2 472 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 CREB3L2Q70SY1 520 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 AAED1Q7RTV5 226 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 NET1Q7Z628 596 aaPredicted RBP6.53□□□□□ -1.36
NUP88-205ENST00000572809 DHDDSQ86SQ9 333 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 ARMC8Q8IUR7 673 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 KDM8Q8N371 416 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 POMGNT2Q8NAT1 580 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 OR9K2Q8NGE7 335 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 OR52N5Q8NH56 324 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 SMAP2Q8WU79 429 aaPredicted RBP6.53□□□□□ -1.36
NUP88-205ENST00000572809 DNAJA4Q8WW22 397 aaPredicted RBP6.53□□□□□ -1.36
NUP88-205ENST00000572809 IGFBPL1Q8WX77 278 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 TMEM45BQ96B21 275 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 KTI12Q96EK9 354 aaPredicted RBP6.53□□□□□ -1.36
NUP88-205ENST00000572809 SLC47A1Q96FL8 570 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 PERPQ96FX8 193 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 C18orf12Q96KH6 178 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 ZNF385AQ96PM9 386 aaKnown RBP6.53□□□□□ -1.36
NUP88-205ENST00000572809 CPPED1Q9BRF8 314 aaPredicted RBP6.53□□□□□ -1.36
NUP88-205ENST00000572809 TMEM120AQ9BXJ8 343 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 CXorf56Q9H5V9 222 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 IFT22Q9H7X7 185 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 EVA1AQ9H8M9 152 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 TMEM27Q9HBJ8 222 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 DLL4Q9NR61 685 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 ERVK13-1Q9NX77 482 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 CISD1Q9NZ45 108 aaKnown RBP6.53□□□□□ -1.36
NUP88-205ENST00000572809 SELENONQ9NZV5 590 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 MALT1Q9UDY8 824 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 SLC13A4Q9UKG4 626 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 MGAT4BQ9UQ53 548 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 LAMP3Q9UQV4 416 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 ANGPT4Q9Y264 503 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 RASD1Q9Y272 281 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 SLC25A15Q9Y619 301 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 AKAP9Q99996 3911 aa6.53□□□□□ -1.36
NUP88-205ENST00000572809 DSCAMO60469 2012 aa6.52□□□□□ -1.37
NUP88-205ENST00000572809 A0A1B0GWA3 101 aa6.52□□□□□ -1.37
NUP88-205ENST00000572809 A0A1W2PR80 420 aa6.52□□□□□ -1.37
NUP88-205ENST00000572809 FTCDNL1E5RQL4 147 aa6.52□□□□□ -1.37
NUP88-205ENST00000572809 PDLIM1O00151 329 aa6.52□□□□□ -1.37
NUP88-205ENST00000572809 TPST2O60704 377 aa6.52□□□□□ -1.37
NUP88-205ENST00000572809 KRT33AO76009 404 aa6.52□□□□□ -1.37
NUP88-205ENST00000572809 LGI1O95970 557 aa6.52□□□□□ -1.37
NUP88-205ENST00000572809 C8BP07358 591 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms