RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 CDH2P19022 906 aaPredicted RBP11.42□□□□□ -0.58
CNOT1-220ENST00000569916 OR1E2P47887 323 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 ZNF83P51522 516 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 GNGT1P63211 74 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 NKX6-1P78426 367 aaPredicted RBP11.42□□□□□ -0.58
CNOT1-220ENST00000569916 IL1RL1Q01638 556 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 POU3F1Q03052 451 aaPredicted RBP11.42□□□□□ -0.58
CNOT1-220ENST00000569916 PUDPQ08623 228 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 SPOCK1Q08629 439 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 FOXD4Q12950 439 aaPredicted RBP11.42□□□□□ -0.58
CNOT1-220ENST00000569916 PMS2P3Q13401 168 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 C1DQ13901 141 aaKnown RBP11.42□□□□□ -0.58
CNOT1-220ENST00000569916 ZNF74Q16587 644 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 TTC33Q6PID6 262 aaPredicted RBP11.42□□□□□ -0.58
CNOT1-220ENST00000569916 TMEM108Q6UXF1 575 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 NHLRC1Q6VVB1 395 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 DEF8Q6ZN54 512 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 UEVLDQ8IX04 471 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 TMEM123Q8N131 208 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 LRRC75A-AS1Q8N1F1 130 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 C10orf53Q8N6V4 93 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 OR1K1Q8NGR3 316 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 FBXW5Q969U6 566 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 OR2M2Q96R28 347 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 SLC19A3Q9BZV2 496 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 POLR2J2Q9GZM3 115 aaKnown RBP11.42□□□□□ -0.58
CNOT1-220ENST00000569916 POLR2J3Q9H1A7 115 aaKnown RBP11.42□□□□□ -0.58
CNOT1-220ENST00000569916 ALG2Q9H553 416 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 ABCD2Q9UBJ2 740 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 ROS1P08922 2347 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 RPL36A-HNRNPH2H7BZ11 118 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 KPNA4O00629 521 aaPredicted RBP11.41□□□□□ -0.58
CNOT1-220ENST00000569916 PLPP3O14495 311 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 AKAP8O43823 692 aaKnown RBP11.41□□□□□ -0.58
CNOT1-220ENST00000569916 SLC43A1O75387 559 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 OR5F1O95221 314 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 DANCRP0C864 163 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 CD99P14209 185 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 PRDX6P30041 224 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 GSK3BP49841 420 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 TAS2R41P59536 307 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 ROR2Q01974 943 aaKnown RBP11.41□□□□□ -0.58
CNOT1-220ENST00000569916 PIN1Q13526 163 aaPredicted RBP11.41□□□□□ -0.58
CNOT1-220ENST00000569916 TBRG1Q3YBR2 411 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 HIKESHIQ53FT3 197 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 C1QTNF12Q5T7M4 302 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 KLHL17Q6TDP4 642 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 SLC46A3Q7Z3Q1 461 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 CPLX4Q7Z7G2 160 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 NKAIN4Q8IVV8 208 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 WDFY1Q8IWB7 410 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 OR5J2Q8NH18 312 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 TMEM171Q8WVE6 324 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 CMTM5Q96DZ9 223 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 C1QTNF6Q9BXI9 259 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 NELFAQ9H3P2 528 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 FKRPQ9H9S5 495 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 MEPEQ9NQ76 525 aaPredicted RBP11.41□□□□□ -0.58
CNOT1-220ENST00000569916 MED29Q9NX70 200 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 CADP27708 2225 aa11.41□□□□□ -0.58
CNOT1-220ENST00000569916 M0R1B8 84 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 CXCR6O00574 342 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 TMCC2O75069 709 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 CH25HO95992 272 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 SOD3P08294 240 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 ADORA3P0DMS8 318 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 PAX1P15863 534 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 PTAFRP25105 342 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 CD40P25942 277 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 PTH2RP49190 550 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 UGT2B15P54855 530 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 CDH11P55287 796 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 SH3BGRP55822 239 aaPredicted RBP11.4□□□□□ -0.58
CNOT1-220ENST00000569916 SELENOWP63302 87 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 PGGHGQ32M88 737 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 Q5PR19 223 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 PHYHD1Q5SRE7 291 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 SHEQ5VZ18 495 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 HMBOX1Q6NT76 420 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 KLHL24Q6TFL4 600 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 PXKQ7Z7A4 578 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 LRRC17Q8N6Y2 441 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 PIK3C3Q8NEB9 887 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 ANKK1Q8NFD2 765 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 TMEM255BQ8WV15 326 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 BCL2L2Q92843 193 aaPredicted RBP11.4□□□□□ -0.58
CNOT1-220ENST00000569916 PERPQ96FX8 193 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 TXNDC15Q96J42 360 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 TPD52L3Q96J77 140 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 EMC6Q9BV81 110 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 GSX2Q9BZM3 304 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 GPR35Q9HC97 309 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 OBP2BQ9NPH6 170 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 NANSQ9NR45 359 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 DLL4Q9NR61 685 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 RIMS3Q9UJD0 308 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 ZNF229Q9UJW7 825 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 MGAT4BQ9UQ53 548 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 LAMP3Q9UQV4 416 aa11.4□□□□□ -0.58
CNOT1-220ENST00000569916 NOX1Q9Y5S8 564 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms