RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 TFAP2EQ6VUC0 442 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 FKBP9P1Q75LS8 142 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 BHLHA15Q7RTS1 189 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-219ENST00000569882 AAED1Q7RTV5 226 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 SPATA21Q7Z572 469 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 CXorf67Q86X51 503 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-219ENST00000569882 CDC20BQ86Y33 519 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 FUNDC1Q8IVP5 155 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 CLIP4Q8N3C7 705 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 LILRB2Q8N423 598 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 SMYD1Q8NB12 490 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 FAM71CQ8NEG0 241 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 STON2Q8WXE9 905 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 SLC38A4Q969I6 547 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 S100PBPQ96BU1 408 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 LRRC58Q96CX6 371 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 RCN3Q96D15 328 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 CMTM5Q96DZ9 223 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 SLC47A1Q96FL8 570 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 ARL5BQ96KC2 179 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 DHRS1Q96LJ7 313 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 ANKRD27Q96NW4 1050 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 WFIKKN1Q96NZ8 548 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 ZNF300Q96RE9 604 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-219ENST00000569882 MCHR1Q99705 422 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 CCL19Q99731 98 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 ELAC2Q9BQ52 826 aaKnown RBP4.28□□□□□ -1.72
CNOT1-219ENST00000569882 CPPED1Q9BRF8 314 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-219ENST00000569882 POTEKPQ9BYX7 375 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 TMPRSS5Q9H3S3 457 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 TMEM38AQ9H6F2 299 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 COQ10BQ9H8M1 238 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 EVA1AQ9H8M9 152 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 BCL2L10Q9HD36 194 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 PLSCR4Q9NRQ2 329 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 RASSF1Q9NS23 344 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 ZNF446Q9NWS9 450 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 ASB6Q9NWX5 421 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 ETAA1Q9NY74 926 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 SLC25A37Q9NYZ2 338 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 JKAMPQ9P055 326 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 ARMCX1Q9P291 453 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 BAG5Q9UL15 447 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 TRAPPC4Q9Y296 219 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 AP3M1Q9Y2T2 418 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 GPR52Q9Y2T5 361 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 TESMINQ9Y4I5 508 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 SNX5Q9Y5X3 404 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 HEATR1Q9H583 2144 aaKnown RBP4.28□□□□□ -1.72
CNOT1-219ENST00000569882 UTP20O75691 2785 aaKnown RBP4.28□□□□□ -1.72
CNOT1-219ENST00000569882 ABCA4P78363 2273 aa4.28□□□□□ -1.72
CNOT1-219ENST00000569882 FREM1Q5H8C1 2179 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 DSPPQ9NZW4 1301 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 A0A0B4J203 849 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 ZNF724A8MTY0 619 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 ZNF587BE7ETH6 402 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 M0QX08 132 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 M0R3H8 397 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 FAAHO00519 579 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 KPNA4O00629 521 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-219ENST00000569882 SLC22A2O15244 555 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 ARHGEF9O43307 516 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 EFNA2O43921 213 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 SMPD2O60906 423 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 BCAS1O75363 584 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-219ENST00000569882 VAMP5O95183 116 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 STAMBPO95630 424 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 NTN1O95631 604 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 ZNF682O95780 498 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 NPPAP01160 153 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 PRG2P13727 222 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 GPX2P18283 190 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 HOXA5P20719 270 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 PTNP21246 168 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 CBLP22681 906 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 CRYGSP22914 178 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 ADSLP30566 484 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-219ENST00000569882 PCGF2P35227 344 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 CAPZA2P47755 286 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 OR3A2P47893 321 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 MVDP53602 400 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 KRTAP10-9P60411 292 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 UBE2NP61088 152 aaKnown RBP4.27□□□□□ -1.73
CNOT1-219ENST00000569882 PMS2P3Q13401 168 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 MFSD13AQ14CX5 517 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 DAZAP2Q15038 168 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-219ENST00000569882 PPA1Q15181 289 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 TSC22D1Q15714 1073 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 VMACQ2NL98 169 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 RUNDC3AQ59EK9 446 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 FBXW9Q5XUX1 488 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 AP1ARQ63HQ0 302 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 OR7E24Q6IFN5 339 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 HMBOX1Q6NT76 420 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 NIPAL3Q6P499 406 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 MZT2AQ6P582 158 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 ULK3Q6PHR2 472 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 TTC33Q6PID6 262 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-219ENST00000569882 DHRS4L2Q6PKH6 230 aa4.27□□□□□ -1.73
CNOT1-219ENST00000569882 ZNF474Q6S9Z5 364 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms