RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ACP6Q9NPH0 428 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 DMAC2Q9NW81 257 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 SLC39A1Q9NY26 324 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 ONECUT1Q9UBC0 465 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 GRID1Q9ULK0 1009 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 OR10H1Q9Y4A9 318 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 FADS3Q9Y5Q0 445 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 KLF2Q9Y5W3 355 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 CSNK1G3Q9Y6M4 447 aa2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 MDC1Q14676 2089 aaKnown RBP2.78□□□□□ -1.96
HMGB1P6-201ENST00000569046 MYO9AB2RTY4 2548 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 IGLV7-46A0A075B6I9 117 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 MEX3AA1L020 520 aaKnown RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 BTBD17A6NE02 478 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 A8MVM7 634 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 SNURFLB1AK76 121 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ABCD4O14678 606 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ARPC3O15145 178 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 P2RX6O15547 441 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZSCAN12O43309 604 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 KLRC4O43908 158 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 FCMRO60667 390 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 TNFP01375 233 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 APOEP02649 317 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 RHOCP08134 193 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 PABPC4LP0CB38 370 aaKnown RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZSCAN5DPP0CG00 497 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZNF44P15621 663 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 NCK1P16333 377 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 TCN2P20062 427 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 AK4P27144 223 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 NUDT1P36639 197 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 CAPGP40121 348 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ALDH3B1P43353 468 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 CCNHP51946 323 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 PLK1P53350 603 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 AP3M2P53677 418 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 RAG2P55895 527 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 BTG1P62324 171 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 PPIAP62937 165 aaKnown RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 RPS21P63220 83 aaKnown RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 CDC20Q12834 499 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 EIF3IQ13347 325 aaKnown RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ARHGAP19Q14CB8 494 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 STK38Q15208 465 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 DPYSL2Q16555 572 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 EXOC3L2Q2M3D2 409 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 PDLIM3Q53GG5 364 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 CARD16Q5EG05 197 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ARMC12Q5T9G4 340 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 C22orf39Q6P5X5 142 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 CENPUQ71F23 418 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 VSTM4Q8IW00 320 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 C12orf56Q8IXR9 622 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 CCDC36Q8IYA8 594 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZNF683Q8IZ20 524 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 SLC38A6Q8IZM9 456 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 DEFB106AQ8N104 65 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 TMEM123Q8N131 208 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ATP6V0D2Q8N8Y2 350 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 MLKLQ8NB16 471 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR7A2PQ8NGA2 310 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR5D13Q8NGL4 314 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR52J3Q8NH60 311 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR1L3Q8NH93 324 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 RAB3IL1Q8TBN0 382 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 MIPOL1Q8TD10 442 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 SMAP2Q8WU79 429 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 APOBEC4Q8WW27 367 aaKnown RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR1E3Q8WZA6 343 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 NAT6Q93015 286 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 KIAA1143Q96AT1 154 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 PDXPQ96GD0 296 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 BTN2A3PQ96KV6 586 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 RANBP9Q96S59 729 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 SIKE1Q9BRV8 207 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 APOOQ9BUR5 198 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 UBXN6Q9BZV1 441 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 PKIBQ9C010 78 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 KAT8Q9H7Z6 458 aaKnown RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 CYP3A43Q9HB55 503 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 MAN2C1Q9NTJ4 1040 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 EXOC1Q9NV70 894 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 UTP6Q9NYH9 597 aaKnown RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZNF319Q9P2F9 582 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 SEC14L3Q9UDX4 400 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 FBXL4Q9UKA2 621 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZNF346Q9UL40 294 aaKnown RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZNF175Q9Y473 711 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR51B4Q9Y5P0 310 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 CENPEQ02224 2701 aa2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 ANKRD17O75179 2603 aaKnown RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 USP9YO00507 2555 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P6-201ENST00000569046 CELSR1Q9NYQ6 3014 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 AHCTF1Q8WYP5 2266 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 NUP210LQ5VU65 1888 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 TRAV26-1A0A087WT03 109 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 A0A1B0GVL5 298 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 A0A1B0GVY2 172 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms