RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 SEC14L5O43304 696 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 KCNAB3O43448 404 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 CTNSO60931 367 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 AGR2O95994 175 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 EGFP01133 1207 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 GNRH1P01148 92 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 TPOP07202 933 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 CDKN2AP42771 156 aaKnown RBP8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 GRK6P43250 576 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 EFNB2P52799 333 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 PSG6Q00889 435 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 LGALS3BPQ08380 585 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 PUDPQ08623 228 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 AANATQ16613 207 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 Q6ZSR6 202 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 NUDT18Q6ZVK8 323 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 MDGA2Q7Z553 956 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 ZNF321PQ8N8H1 164 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 ZNF784Q8NCA9 323 aaPredicted RBP8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 DUSP19Q8WTR2 217 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 TMEM106AQ96A25 262 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 WDR92Q96MX6 357 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 LINC00052Q96N35 136 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 PTDSS2Q9BVG9 487 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 EMC7Q9NPA0 242 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 DNAJB12Q9NXW2 375 aaKnown RBP8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 SLC22A13Q9Y226 551 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 PCDHGA5Q9Y5G8 931 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 V9GY05 133 aa8.2□□□□□ -1.1
HDGFL3-206ENST00000568294 TRAV8-7A0A075B6U6 113 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 DCDC2BA2VCK2 349 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 IFITM5A6NNB3 132 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 J3QRE1 110 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 BRINP1O60477 761 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 CDC40O60508 579 aaKnown RBP eCLIP8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 TRIM3O75382 744 aaPredicted RBP8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 PLATP00750 562 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 SERPINA3P01011 423 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 SPARCP09486 303 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 BTG1P62324 171 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 ACTC1P68032 377 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 ACTA1P68133 377 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 HTRA4P83105 476 aaPredicted RBP8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 BIKQ13323 160 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 C2orf68Q2NKX9 166 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 PRICKLE4Q2TBC4 344 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 C1QL3Q5VWW1 255 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 CD276Q5ZPR3 534 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 BTN2A1Q7KYR7 527 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 SLC37A2Q8TED4 501 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 FAM46BQ96A09 425 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 SLC25A38Q96DW6 304 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 AHCYL2Q96HN2 611 aaKnown RBP8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 ADOQ96SZ5 270 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 SLITRK2Q9H156 845 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 ANKRD19PQ9H560 264 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 B3GNT2Q9NY97 397 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 OR5V1Q9UGF6 321 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 ELF5Q9UKW6 265 aaPredicted RBP8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 SDC3O75056 442 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 OR6A2O95222 327 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 SORDQ00796 357 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 ITPRIPL2Q3MIP1 535 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 OR7E24Q6IFN5 339 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 CA13Q8N1Q1 262 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 OR13H1Q8NG92 308 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 EXO5Q9H790 373 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 C12orf4Q9NQ89 552 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 CPNE7Q9UBL6 633 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 CGGBP1Q9UFW8 167 aaPredicted RBP8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 CAMK2AQ9UQM7 478 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 CREBL2O60519 120 aaPredicted RBP8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 ITGA10O75578 1167 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 APOC3P02656 99 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 CXCL2P19875 107 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 P2RX1P51575 399 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 MAP2K6P52564 334 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 AKR1C2P52895 323 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 AKR1C1Q04828 323 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 KLF9Q13886 244 aaPredicted RBP8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 UBE2NLQ5JXB2 153 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 USP53Q70EK8 1073 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 TPRA1Q86W33 373 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 FAM160A2Q8N612 972 aaPredicted RBP8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 OR5AK2Q8NH90 309 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 SMIM4Q8WVI0 70 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 RGP1Q92546 391 aaPredicted RBP8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 SEC22AQ96IW7 307 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 DGAT2Q96PD7 388 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 GFI1Q99684 422 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 B3GNT4Q9C0J1 378 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 PITHD1Q9GZP4 211 aaPredicted RBP8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 Q9N2J8 555 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 SCP2D1Q9UJQ7 156 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 SLCO1B1Q9Y6L6 691 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 CABIN1Q9Y6J0 2220 aa8.19□□□□□ -1.1
HDGFL3-206ENST00000568294 SOX1O00570 391 aaPredicted RBP8.18□□□□□ -1.1
HDGFL3-206ENST00000568294 HCRTR2O43614 444 aa8.18□□□□□ -1.1
HDGFL3-206ENST00000568294 OR1D4P47884 311 aa8.18□□□□□ -1.1
HDGFL3-206ENST00000568294 TAS2R20P59543 309 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms