RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 DHRSXQ8N5I4 330 aa11.97□□□□□ -0.49
CLK3-218ENST00000566926 ZNF555Q8NEP9 628 aa11.97□□□□□ -0.49
CLK3-218ENST00000566926 ROBO4Q8WZ75 1007 aa11.97□□□□□ -0.49
CLK3-218ENST00000566926 ZNF524Q96C55 264 aa11.97□□□□□ -0.49
CLK3-218ENST00000566926 DDIT4LQ96D03 193 aa11.97□□□□□ -0.49
CLK3-218ENST00000566926 DACH2Q96NX9 599 aa11.97□□□□□ -0.49
CLK3-218ENST00000566926 WFDC6Q9BQY6 131 aa11.97□□□□□ -0.49
CLK3-218ENST00000566926 ADI1Q9BV57 179 aa11.97□□□□□ -0.49
CLK3-218ENST00000566926 DGCR6LQ9BY27 220 aa11.97□□□□□ -0.49
CLK3-218ENST00000566926 SRXN1Q9BYN0 137 aa11.97□□□□□ -0.49
CLK3-218ENST00000566926 OPN3Q9H1Y3 402 aaPredicted RBP11.97□□□□□ -0.49
CLK3-218ENST00000566926 PAPOLBQ9NRJ5 636 aaKnown RBP11.97□□□□□ -0.49
CLK3-218ENST00000566926 KRT84Q9NSB2 600 aa11.97□□□□□ -0.49
CLK3-218ENST00000566926 MAN2C1Q9NTJ4 1040 aa11.97□□□□□ -0.49
CLK3-218ENST00000566926 SPG11Q96JI7 2443 aa11.97□□□□□ -0.49
CLK3-218ENST00000566926 TMED7-TICAM2A0A0A6YYA0 188 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 TRBV4-1A0A0J9YWV2 114 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 A0A1W2PNR3 127 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 CASKO14936 926 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 ZNF208O43345 1280 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 PMS2P2O95744 297 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 IGF2P01344 180 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 YES1P07947 543 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 GKN3PP0CG01 181 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 CBLP22681 906 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 HTR2AP28223 471 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 CAPGP40121 348 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 DIO1P49895 249 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 UGT2B15P54855 530 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 PLAURQ03405 335 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 SNTB1Q13884 538 aaKnown RBP11.96□□□□□ -0.49
CLK3-218ENST00000566926 ALG10BQ5I7T1 473 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 ZNF770Q6IQ21 691 aaPredicted RBP11.96□□□□□ -0.49
CLK3-218ENST00000566926 PODNL1Q6PEZ8 512 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 TBPL2Q6SJ96 375 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 CD300LDQ6UXZ3 194 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 ZNF730Q6ZMV8 503 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 MBOAT2Q6ZWT7 520 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 ADGRG3Q86Y34 549 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 ZNF610Q8N9Z0 462 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 AQP11Q8NBQ7 271 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 PIGXQ8TBF5 258 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 TFAP2CQ92754 450 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 FEVQ99581 238 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 GABARAPL3Q9BY60 117 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 ANKRD60Q9BZ19 345 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 SLC19A3Q9BZV2 496 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 KLHL13Q9P2N7 655 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 RHCGQ9UBD6 479 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 CLEC4AQ9UMR7 237 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 EDARQ9UNE0 448 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 TMEM5Q9Y2B1 443 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 TMED7Q9Y3B3 224 aa11.96□□□□□ -0.49
CLK3-218ENST00000566926 A0A1B0GWA3 101 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 SH3D21A4FU49 640 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 A6NNC1 897 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 C16orf97H3BN30 126 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 CYTIPO60759 359 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 ADAM11O75078 769 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 PRG2P13727 222 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 CXCR1P25024 350 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 TACR3P29371 465 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 AGTR1P30556 359 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 DAPP51397 102 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 ESRRGP62508 458 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 FAM27E3Q08E93 113 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 RASGEF1BQ0VAM2 473 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 C1orf94Q6P1W5 598 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 ZNF474Q6S9Z5 364 aaPredicted RBP11.95□□□□□ -0.5
CLK3-218ENST00000566926 HS3ST5Q8IZT8 346 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 OR4K5Q8NGD3 323 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 LINC01560Q8TB33 94 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 ABHD3Q8WU67 409 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 ZNF426Q9BUY5 554 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 ADAM19Q9H013 955 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 SMURF2Q9HAU4 748 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 TMEFF2Q9UIK5 374 aaPredicted RBP11.95□□□□□ -0.5
CLK3-218ENST00000566926 OSGIN1Q9UJX0 560 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 SLC7A7Q9UM01 511 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 TRAPPC4Q9Y296 219 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 MAGED1Q9Y5V3 778 aaPredicted RBP11.95□□□□□ -0.5
CLK3-218ENST00000566926 AKAP6Q13023 2319 aa11.95□□□□□ -0.5
CLK3-218ENST00000566926 LRBAP50851 2863 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 DLGAP1O14490 977 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 SLC16A6O15403 523 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 EIF1BO60739 113 aaKnown RBP11.94□□□□□ -0.5
CLK3-218ENST00000566926 CTAG2O75638 210 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 SNAP29O95721 258 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 PRKACGP22612 351 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 FPR3P25089 353 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 SLC35A1P78382 337 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 HOXC5Q00444 222 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 PPP1R8Q12972 351 aaKnown RBP11.94□□□□□ -0.5
CLK3-218ENST00000566926 KEAP1Q14145 624 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 SEC23BQ15437 767 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 SLC36A3Q495N2 470 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 PGBD2Q6P3X8 592 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 C5orf46Q6UWT4 87 aa11.94□□□□□ -0.5
CLK3-218ENST00000566926 TSPYL5Q86VY4 417 aaPredicted RBP11.94□□□□□ -0.5
CLK3-218ENST00000566926 TUSC5Q8IXB3 177 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms