RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 STX18Q9P2W9 335 aaKnown RBP2.28□□□□□ -2.04
PALB2-204ENST00000566069 GNG12Q9UBI6 72 aa2.28□□□□□ -2.04
PALB2-204ENST00000566069 CD300AQ9UGN4 299 aa2.28□□□□□ -2.04
PALB2-204ENST00000566069 PACSIN2Q9UNF0 486 aaPredicted RBP2.28□□□□□ -2.04
PALB2-204ENST00000566069 SLC22A14Q9Y267 594 aa2.28□□□□□ -2.04
PALB2-204ENST00000566069 SLCO1B1Q9Y6L6 691 aa2.28□□□□□ -2.04
PALB2-204ENST00000566069 ARHGAP21Q5T5U3 1957 aa2.28□□□□□ -2.04
PALB2-204ENST00000566069 ADCY9O60503 1353 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 CCDC171Q6TFL3 1326 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 A0A1B0GVG6 124 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 TMEM120BA0PK00 339 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 XKRY2A2RUG3 117 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 ZNF879B4DU55 563 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 E7ESA3 106 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 E9PBE3 544 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 NPIPA7E9PJI5 369 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 G3V4G9 280 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 PSMD11O00231 422 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 CASC3O15234 703 aaKnown RBP2.27□□□□□ -2.05
PALB2-204ENST00000566069 HCRTR1O43613 425 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 PRKYO43930 277 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 SMIM24O75264 130 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 SUPT7LO94864 414 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 SNAPINO95295 136 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 CA1P00915 261 aaPredicted RBP2.27□□□□□ -2.05
PALB2-204ENST00000566069 STAG3L3P0CL85 134 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 NPIPA8P0DM63 369 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 GLRA2P23416 452 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 CCNE1P24864 410 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 CRABP2P29373 138 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 YWHABP31946 246 aaKnown RBP2.27□□□□□ -2.05
PALB2-204ENST00000566069 IFNA8P32881 189 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 HPCAL1P37235 193 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 PRKXP51817 358 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 HNRNPA3P51991 378 aaKnown RBP2.27□□□□□ -2.05
PALB2-204ENST00000566069 NUP107P57740 925 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 RAB14P61106 215 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 S100A12P80511 92 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 DDX39BQ13838 428 aaKnown RBP2.27□□□□□ -2.05
PALB2-204ENST00000566069 SGCAQ16586 387 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 TATDN3Q17R31 274 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 ZNF658BQ4V348 819 aaPredicted RBP2.27□□□□□ -2.05
PALB2-204ENST00000566069 TTMPQ5BVD1 217 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 SPECC1LQ69YQ0 1117 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 TTC23LQ6PF05 361 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 IGFL2Q6UWQ7 119 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 LRRC6Q86X45 466 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 VRK2Q86Y07 508 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 NELFCDQ8IXH7 590 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 BBS5Q8N3I7 341 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 CSGALNACT2Q8N6G5 542 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 SNX31Q8N9S9 440 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 ZNF680Q8NEM1 530 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 SPATA4Q8NEY3 305 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 TTLQ8NG68 377 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 OR52I1Q8NGK6 324 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 AKR7LQ8NHP1 331 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 NEIL3Q8TAT5 605 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 CCDC12Q8WUD4 166 aaPredicted RBP2.27□□□□□ -2.05
PALB2-204ENST00000566069 PDCD6IPQ8WUM4 868 aaKnown RBP2.27□□□□□ -2.05
PALB2-204ENST00000566069 TCTEX1D2Q8WW35 142 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 MRPS31Q92665 395 aaKnown RBP2.27□□□□□ -2.05
PALB2-204ENST00000566069 THRSPQ92748 146 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 KIAA1143Q96AT1 154 aaPredicted RBP2.27□□□□□ -2.05
PALB2-204ENST00000566069 TMA16Q96EY4 203 aaKnown RBP2.27□□□□□ -2.05
PALB2-204ENST00000566069 CCDC42Q96M95 316 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 PANX2Q96RD6 677 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 RIT2Q99578 217 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 SLC29A1Q99808 456 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 SLC35A5Q9BS91 424 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 BBS2Q9BXC9 721 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 SHCBP1LQ9BZQ2 653 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 YIPF3Q9GZM5 350 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 TPK1Q9H3S4 243 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 NARFLQ9H6Q4 476 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 SMYD3Q9H7B4 428 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 TRIM45Q9H8W5 580 aaPredicted RBP2.27□□□□□ -2.05
PALB2-204ENST00000566069 MEAF6Q9HAF1 191 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 MRPL47Q9HD33 250 aaKnown RBP2.27□□□□□ -2.05
PALB2-204ENST00000566069 SLC7A8Q9UHI5 535 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 BTNL2Q9UIR0 455 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 TMCO1Q9UM00 188 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 NPIPA1Q9UND3 350 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 RASD1Q9Y272 281 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 AP3M1Q9Y2T2 418 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 NACAE9PAV3 2078 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 NISCHQ9Y2I1 1504 aa2.27□□□□□ -2.05
PALB2-204ENST00000566069 SBNO1A3KN83 1393 aa2.26□□□□□ -2.05
PALB2-204ENST00000566069 PHLPP2Q6ZVD8 1323 aa2.26□□□□□ -2.05
PALB2-204ENST00000566069 TTC21AQ8NDW8 1320 aa2.26□□□□□ -2.05
PALB2-204ENST00000566069 SH3TC1Q8TE82 1336 aa2.26□□□□□ -2.05
PALB2-204ENST00000566069 GOLGA8QA0A0J9YX86 632 aa2.26□□□□□ -2.05
PALB2-204ENST00000566069 LOC100506127A0A0U1RQW1 187 aa2.26□□□□□ -2.05
PALB2-204ENST00000566069 GSTTP1A0A1W2PQM5 241 aa2.26□□□□□ -2.05
PALB2-204ENST00000566069 PSMB11A5LHX3 300 aa2.26□□□□□ -2.05
PALB2-204ENST00000566069 GOLGA8OA6NCC3 632 aa2.26□□□□□ -2.05
PALB2-204ENST00000566069 HELTA6NFD8 242 aa2.26□□□□□ -2.05
PALB2-204ENST00000566069 USP27XA6NNY8 438 aa2.26□□□□□ -2.05
PALB2-204ENST00000566069 GOLGA8NF8WBI6 632 aa2.26□□□□□ -2.05
PALB2-204ENST00000566069 XPO1O14980 1071 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms