RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 LRRC31Q6UY01 552 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 H2BFWTQ7Z2G1 175 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 PLA2G4DQ86XP0 818 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 TGIF2LXQ8IUE1 241 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 PIANPQ8IYJ0 282 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 FAM71E2Q8N5Q1 922 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 TPRX1Q8N7U7 411 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 SDR9C7Q8NEX9 313 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 PYROXD1Q8WU10 500 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 NT5C3BQ969T7 300 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 PLEKHA8Q96JA3 519 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 CNN2Q99439 309 aaKnown RBP2.96□□□□□ -1.94
CHD9-215ENST00000565442 TMEM246Q9BRR3 403 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 RIOK1Q9BRS2 568 aaKnown RBP2.96□□□□□ -1.94
CHD9-215ENST00000565442 GBA3Q9H227 469 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 ANKRD19PQ9H560 264 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 IL26Q9NPH9 171 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 CCL28Q9NRJ3 127 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 SLC7A8Q9UHI5 535 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 ZNF225Q9UK10 706 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 HPCAL4Q9UM19 191 aa2.96□□□□□ -1.94
CHD9-215ENST00000565442 FAM240BA0A1B0GVZ2 78 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 PINLYPA6NC86 204 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 A6NDX4 124 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 C12orf77C9JDV5 145 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 UBTFL1P0CB47 393 aaPredicted RBP2.95□□□□□ -1.94
CHD9-215ENST00000565442 MGMTP16455 207 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 RCC1P18754 421 aaPredicted RBP2.95□□□□□ -1.94
CHD9-215ENST00000565442 NCF2P19878 526 aaPredicted RBP2.95□□□□□ -1.94
CHD9-215ENST00000565442 MX1P20591 662 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 SLC2A5P22732 501 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 CCNCP24863 283 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 RPS10P46783 165 aaKnown RBP2.95□□□□□ -1.94
CHD9-215ENST00000565442 GYG1P46976 350 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 TPMTP51580 245 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 RPL23AP62750 156 aaKnown RBP2.95□□□□□ -1.94
CHD9-215ENST00000565442 BST1Q10588 318 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 GK3PQ14409 553 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 GNMTQ14749 295 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 GPNMBQ14956 572 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 CYTH1Q15438 398 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 DGUOKQ16854 277 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 C6orf226Q5I0X4 101 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 CTSL3PQ5NE16 218 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 THOC6Q86W42 341 aaKnown RBP2.95□□□□□ -1.94
CHD9-215ENST00000565442 MKXQ8IYA7 352 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 Q8N9W7 124 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 ACOT11Q8WXI4 607 aaPredicted RBP2.95□□□□□ -1.94
CHD9-215ENST00000565442 CYYR1Q96J86 154 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 IFT74Q96LB3 600 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 MS4A4EQ96PG1 132 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 SRMSQ9H3Y6 488 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 NIPAL2Q9H841 368 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 LY9Q9HBG7 655 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 EML4Q9HC35 981 aaKnown RBP2.95□□□□□ -1.94
CHD9-215ENST00000565442 CLCF1Q9UBD9 225 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 LTBP1Q14766 1721 aa2.95□□□□□ -1.94
CHD9-215ENST00000565442 OR7A10O76100 309 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 CMA1P23946 247 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 REG3AQ06141 175 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 KIAA0087Q14695 138 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 RABL6Q3YEC7 729 aaPredicted RBP2.94□□□□□ -1.94
CHD9-215ENST00000565442 IGFL2Q6UWQ7 119 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 C19orf35Q6ZS72 473 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 UBE2J2Q8N2K1 259 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 ZNF433Q8N7K0 673 aaPredicted RBP2.94□□□□□ -1.94
CHD9-215ENST00000565442 ACER1Q8TDN7 264 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 SMARCD2Q92925 531 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 OR2M2Q96R28 347 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 CHRDL1Q9BU40 450 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 RIOK2Q9BVS4 552 aaKnown RBP2.94□□□□□ -1.94
CHD9-215ENST00000565442 FAIM2Q9BWQ8 316 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 DEFB127Q9H1M4 99 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 CLMPQ9H6B4 373 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 METTL7AQ9H8H3 244 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 ZFP14Q9HCL3 533 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 ADAP2Q9NPF8 381 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 ZNF331Q9NQX6 463 aaPredicted RBP2.94□□□□□ -1.94
CHD9-215ENST00000565442 CALYQ9NYX4 217 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 PRG3Q9Y2Y8 225 aaPredicted RBP2.94□□□□□ -1.94
CHD9-215ENST00000565442 KANK1Q14678 1352 aa2.94□□□□□ -1.94
CHD9-215ENST00000565442 FANCIQ9NVI1 1328 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 COL16A1Q07092 1604 aaPredicted RBP2.93□□□□□ -1.94
CHD9-215ENST00000565442 A0A0G2JN53 185 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 A0A1W2PPV9 198 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 CCDC182A6NF36 153 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 C12orf71A8MTZ7 269 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 C1orf105O95561 183 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 MDKP21741 143 aaPredicted RBP2.93□□□□□ -1.94
CHD9-215ENST00000565442 ERVK-25P63136 954 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 PPIL2Q13356 520 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 MPPED2Q15777 294 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 ZNF77Q15935 545 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 KCTD21Q4G0X4 260 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 ZNF658BQ4V348 819 aaPredicted RBP2.93□□□□□ -1.94
CHD9-215ENST00000565442 PRAMEF5Q5TYX0 476 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 PRAMEF6Q5VXH4 476 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 LCN12Q6JVE5 192 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 TRIM40Q6P9F5 258 aa2.93□□□□□ -1.94
CHD9-215ENST00000565442 LRRC74BQ6ZQY2 392 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms