RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 A0A1W2PNV4 684 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ZC3H12DA2A288 527 aaKnown RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 LINC00862A6NCI5 91 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ANXA2P2A6NMY6 339 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ARHGEF33A8MVX0 844 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 MKRN2OSH3BPM6 223 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 BCAT2O15382 392 aaPredicted RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ZNF208O43345 1280 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 PRAMEF1O95521 474 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 SLC16A8O95907 504 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 C9P02748 559 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 FABP3P05413 133 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 RD3LP0DJH9 198 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ADORA3P0DMS8 318 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 AMD1P17707 334 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 SPI1P17947 270 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ADRA2CP18825 462 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 NDUFS1P28331 727 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ERP29P30040 261 aaKnown RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 SSTR2P30874 369 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 KDELR2P33947 212 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 SOAT1P35610 550 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 GGT2P36268 569 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 MMP12P39900 470 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 CSKP41240 450 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 RAB9AP51151 201 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 PRKXP51817 358 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 HMGA2P52926 109 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 PNLIPRP2P54317 469 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 UGT2B15P54855 530 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 WNT3P56703 355 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ERVFRD-1P60508 538 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ERVK-25P63136 954 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 CSNK2A1P68400 391 aaPredicted RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 SLC7A9P82251 487 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 BCL2L1Q07817 233 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 STX4Q12846 297 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 GPR50Q13585 617 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ZNF169Q14929 603 aaPredicted RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 SMN1Q16637 294 aaKnown RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 DUOXA1Q1HG43 343 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 TIMM50Q3ZCQ8 353 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 PAN3Q58A45 887 aaKnown RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 TMEM41BQ5BJD5 291 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ABHD17BQ5VST6 288 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 FAHD2BQ6P2I3 314 aaPredicted RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 XKRXQ6PP77 449 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 BTNL3Q6UXE8 466 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ZNF517Q6ZMY9 492 aaPredicted RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 CFAP77Q6ZQR2 320 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 AHSA2Q719I0 299 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 MRPL21Q7Z2W9 205 aaKnown RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 LYG2Q86SG7 212 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 TMEM150AQ86TG1 271 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ZNF100Q8IYN0 542 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 BOD1L2Q8IYS8 172 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 NLGN4XQ8N0W4 816 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 SPAG16Q8N0X2 631 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ARRDC1Q8N5I2 433 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 TMEM156Q8N614 296 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 LINC01356Q8N9X3 169 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 CCDC71LQ8N9Z2 235 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 MFSD9Q8NBP5 474 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 CSNK2A3Q8NEV1 391 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 TMEM185AQ8NFB2 350 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 NUP43Q8NFH3 380 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 STOML3Q8TAV4 291 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ASB5Q8WWX0 329 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 SMPDL3BQ92485 455 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 DNASE1L2Q92874 299 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ERGIC1Q969X5 290 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ESAMQ96AP7 390 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ARRDC3Q96B67 414 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 C3orf49Q96BT1 292 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 WDR34Q96EX3 536 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 SAT2Q96F10 170 aaPredicted RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 FAHD2AQ96GK7 314 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 RNF170Q96K19 258 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 COQ10AQ96MF6 247 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 COL21A1Q96P44 957 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 SLC22A12Q96S37 553 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 RNF2Q99496 336 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 SDHCQ99643 169 aaPredicted RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 EPYCQ99645 322 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 SEPT5Q99719 369 aaPredicted RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 TCEAL7Q9BRU2 100 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 UTP23Q9BRU9 249 aaKnown RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 RHNO1Q9BSD3 238 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 MED18Q9BUE0 208 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 GGACTQ9BVM4 153 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 NUAK2Q9H093 628 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 CHST8Q9H2A9 424 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 UBQLN3Q9H347 655 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 ZNF160Q9HCG1 818 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 NIT2Q9NQR4 276 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 BIN3Q9NQY0 253 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 NANSQ9NR45 359 aa4.72□□□□□ -1.65
CAPN3-214ENST00000565274 MRPL22Q9NWU5 206 aaKnown RBP4.72□□□□□ -1.65
CAPN3-214ENST00000565274 SPG21Q9NZD8 308 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms