RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ATE1O95260 518 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 BCL10O95999 233 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 ADRA2AP08913 450 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 LIMS3P0CW19 117 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 LIMS4P0CW20 117 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 CNR1P21554 472 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 ITGA3P26006 1051 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 SRD5A2P31213 254 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 BLVRAP53004 296 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 SOX8P57073 446 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 RAP1BP61224 184 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 RPL27P61353 136 aaKnown RBP14.03□□□□□ -0.16
COMMD4-210ENST00000564587 RAP1AP62834 184 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 BDH1Q02338 343 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 NFATC3Q12968 1075 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 TSTQ16762 297 aaKnown RBP14.03□□□□□ -0.16
COMMD4-210ENST00000564587 B3GNTL1Q67FW5 361 aaPredicted RBP14.03□□□□□ -0.16
COMMD4-210ENST00000564587 SLC6A19Q695T7 634 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 LEG1Q6P5S2 330 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 C19orf48Q6RUI8 117 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 BEST3Q8N1M1 668 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 ARIH2OSQ8N7S6 290 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 ZNF417Q8TAU3 575 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 KISS1RQ969F8 398 aaPredicted RBP14.03□□□□□ -0.16
COMMD4-210ENST00000564587 NXPE2Q96DL1 559 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 ZNF587Q96SQ5 575 aaPredicted RBP14.03□□□□□ -0.16
COMMD4-210ENST00000564587 NMNAT3Q96T66 252 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 CNN2Q99439 309 aaKnown RBP14.03□□□□□ -0.16
COMMD4-210ENST00000564587 UTP23Q9BRU9 249 aaKnown RBP14.03□□□□□ -0.16
COMMD4-210ENST00000564587 HCAR1Q9BXC0 346 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 CHST11Q9NPF2 352 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 SEC14L4Q9UDX3 406 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 ZNF346Q9UL40 294 aaKnown RBP14.03□□□□□ -0.16
COMMD4-210ENST00000564587 TRAPPC4Q9Y296 219 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 NOX1Q9Y5S8 564 aa14.03□□□□□ -0.16
COMMD4-210ENST00000564587 MRPS18BQ9Y676 258 aaKnown RBP14.03□□□□□ -0.16
COMMD4-210ENST00000564587 CFAP47Q6ZTR5 3102 aa14.02□□□□□ -0.16
COMMD4-210ENST00000564587 FRYLO94915 3013 aa14.02□□□□□ -0.16
COMMD4-210ENST00000564587 AHCTF1Q8WYP5 2266 aa14.02□□□□□ -0.16
COMMD4-210ENST00000564587 DAPL1A0PJW8 107 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 AKAP8O43823 692 aaKnown RBP14.02□□□□□ -0.17
COMMD4-210ENST00000564587 AHCYL1O43865 530 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 F13BP05160 661 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 OR2T7P0C7T2 308 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 SPI1P17947 270 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 AHCYP23526 432 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 PSMA1P25786 263 aaKnown RBP14.02□□□□□ -0.17
COMMD4-210ENST00000564587 UGT2B10P36537 528 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 DAP3P51398 398 aaKnown RBP14.02□□□□□ -0.17
COMMD4-210ENST00000564587 TUBA1BP68363 451 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 OC90Q02509 493 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-210ENST00000564587 HSF2Q03933 536 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 PUDPQ08623 228 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 TPBGQ13641 420 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 GALEQ14376 348 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 OR7A5Q15622 319 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 GXYLT1Q4G148 440 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 TUBA1AQ71U36 451 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 HDDC2Q7Z4H3 204 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 OR2T27Q8NH04 317 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 RASD2Q96D21 266 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 OPALINQ96PE5 141 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 TSPAN32Q96QS1 320 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 MNTQ99583 582 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 PIGQQ9BRB3 760 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 ARHGAP9Q9BRR9 750 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 ADGRL4Q9HBW9 690 aa14.02□□□□□ -0.17
COMMD4-210ENST00000564587 BOKQ9UMX3 212 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-210ENST00000564587 EP300Q09472 2414 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-210ENST00000564587 A0A1W2PNV4 684 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 OR6C68A6NDL8 312 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 C12orf71A8MTZ7 269 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 LINC01387J3KSC0 135 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 CPEP16870 476 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 PCSK6P29122 969 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 CDKN2AP42771 156 aaKnown RBP14.01□□□□□ -0.17
COMMD4-210ENST00000564587 SLC35A1P78382 337 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 TLE3Q04726 772 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 GPR50Q13585 617 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 RTP5Q14D33 572 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 ZNF239Q16600 458 aaKnown RBP14.01□□□□□ -0.17
COMMD4-210ENST00000564587 ST3GAL2Q16842 350 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 ZNF468Q5VIY5 522 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-210ENST00000564587 PXKQ7Z7A4 578 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 LHFPL3Q86UP9 236 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 KBTBD8Q8NFY9 601 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 KCNE4Q8WWG9 221 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 SMPDL3BQ92485 455 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 UFD1Q92890 307 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 ARL5BQ96KC2 179 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 NDUFB11Q9NX14 153 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 LRFN1Q9P244 771 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 HRH3Q9Y5N1 445 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 FKBP7Q9Y680 259 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 PTPRBP23467 1997 aa14.01□□□□□ -0.17
COMMD4-210ENST00000564587 KMT2BQ9UMN6 2715 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-210ENST00000564587 A0A1W2PPW3 197 aa14□□□□□ -0.17
COMMD4-210ENST00000564587 C11orf98E9PRG8 122 aa14□□□□□ -0.17
COMMD4-210ENST00000564587 H3BML4 177 aa14□□□□□ -0.17
COMMD4-210ENST00000564587 MASP2O00187 686 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms