RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SLC17A6Q9P2U8 582 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 LHX3Q9UBR4 397 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 IKZF2Q9UKS7 526 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 TCF19Q9Y242 345 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 BRCA1P38398 1863 aaKnown RBP4.29□□□□□ -1.72
SMG1-207ENST00000563235 LTBP1Q14766 1721 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 PPLO60437 1756 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 TRABD2BA6NFA1 517 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 H3BS24 57 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 J3QLI3 93 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 M0R3G1 203 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 DLEU1O43261 78 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 CHP2O43745 196 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 EFNA2O43921 213 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 FARS2O95363 451 aaKnown RBP4.29□□□□□ -1.72
SMG1-207ENST00000563235 C9P02748 559 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 HPXP02790 462 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 ATP1A1P05023 1023 aaKnown RBP4.29□□□□□ -1.72
SMG1-207ENST00000563235 HOXB5P09067 269 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 UCHL3P15374 230 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 MTHFSP49914 203 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 NDUFA8P51970 172 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 LOXL3P58215 753 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 RPL32P62910 135 aaKnown RBP4.29□□□□□ -1.72
SMG1-207ENST00000563235 MAD2L1BPQ15013 274 aaPredicted RBP4.29□□□□□ -1.72
SMG1-207ENST00000563235 DGUOKQ16854 277 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 PLEKHN1Q494U1 663 aaPredicted RBP4.29□□□□□ -1.72
SMG1-207ENST00000563235 SDHAF4Q5VUM1 108 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 DRAM2Q6UX65 266 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 HACD2Q6Y1H2 254 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 GCNT7Q6ZNI0 430 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 MON1BQ7L1V2 547 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 CTU1Q7Z7A3 348 aaKnown RBP4.29□□□□□ -1.72
SMG1-207ENST00000563235 TMEM135Q86UB9 458 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 SATL1Q86VE3 508 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 NOXO1Q8NFA2 376 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 IL17DQ8TAD2 202 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 STOML3Q8TAV4 291 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 PDXPQ96GD0 296 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 C14orf144Q96I85 54 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 OR14A2Q96R54 314 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 TMED9Q9BVK6 235 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 CDH20Q9HBT6 801 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 EML4Q9HC35 981 aaKnown RBP4.29□□□□□ -1.72
SMG1-207ENST00000563235 IL23AQ9NPF7 189 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 ASB6Q9NWX5 421 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 LAMP3Q9UQV4 416 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 CACNA1FO60840 1977 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 BTAF1O14981 1849 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 LY75O60449 1722 aa4.29□□□□□ -1.72
SMG1-207ENST00000563235 C3orf70A6NLC5 250 aaPredicted RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 PROB1E7EW31 1015 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 H3BMH7 237 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 ACOT8O14734 319 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 ENSAO43768 121 aaKnown RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 SCGNO76038 276 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 LATS1O95835 1130 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 OR8U9P0C7N5 309 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 SMIM6P0DI80 62 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 SMIM18P0DKX4 95 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 MYL2P10916 166 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 RAB3AP20336 220 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 ARR3P36575 388 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 NOVA1P51513 510 aaKnown RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 AKR1D1P51857 326 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 DLX5P56178 289 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 CD81P60033 236 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 IL5RAQ01344 420 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 EXOSC7Q15024 291 aaKnown RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 MPPED2Q15777 294 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 RPEL1Q2QD12 228 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 HLA-BQ31612 363 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 PGGHGQ32M88 737 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TIGD2Q4W5G0 525 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 ACSBG2Q5FVE4 666 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 SYT6Q5T7P8 510 aaPredicted RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 PRR27Q6MZM9 219 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 CDHR3Q6ZTQ4 885 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 Q7L0L9 218 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 CYB5R4Q7L1T6 521 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 CFAP52Q8N1V2 620 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 LINC00301Q8NCQ3 95 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 OR51D1Q8NGF3 324 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 U2AF1L4Q8WU68 220 aaKnown RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 ADAMTS14Q8WXS8 1223 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 PYCR2Q96C36 320 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 ALKBH3Q96Q83 286 aaPredicted RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 OR6C1Q96RD1 312 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 KCNA7Q96RP8 456 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 RBM38Q9H0Z9 239 aaKnown RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 FKRPQ9H9S5 495 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 SLC2A9Q9NRM0 540 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 ACOXLQ9NUZ1 547 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TREM2Q9NZC2 230 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 STEAP1Q9UHE8 339 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 SNX12Q9UMY4 172 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 COPS3Q9UNS2 423 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 TFR2Q9UP52 801 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 KLHDC2Q9Y2U9 406 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms