RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CELA2BP08218 269 aaPredicted RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 MRPL3P09001 348 aaKnown RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 ZNF182P17025 639 aaPredicted RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 CD82P27701 267 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 AVPR2P30518 371 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 RAB5CP51148 216 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 ADARB1P78563 741 aaKnown RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 RBPJQ06330 500 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 ZNF362Q5T0B9 420 aaPredicted RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 ST8SIA4Q92187 359 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 LGALS12Q96DT0 336 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 NARFLQ9H6Q4 476 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 GPN1Q9HCN4 374 aaPredicted RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 MYOFQ9NZM1 2061 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 TRBV2A0A0J9YWF9 115 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 CBY3A6NI87 242 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 SELENBP1Q13228 472 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 ZNF169Q14929 603 aaPredicted RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 ARL6IP1Q15041 203 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 RNF212Q495C1 297 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 EMC4Q5J8M3 183 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 JMJD6Q6NYC1 403 aaPredicted RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 MSRB3Q8IXL7 192 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 SPTSSAQ969W0 71 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 ALG8Q9BVK2 526 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 DSN1Q9H410 356 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 NIPAL2Q9H841 368 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 TRBV5-3A0A0A0MS03 114 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 CIB4A0PJX0 185 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 B4E171 279 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 RGS13O14921 159 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 TCAPO15273 167 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 EDN3P14138 238 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 PTNP21246 168 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 DLSTP36957 453 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 TSPAN7P41732 249 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 HOXA1P49639 335 aaPredicted RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 MLLT11Q13015 90 aaPredicted RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 TMEM201Q5SNT2 666 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 TCTN3Q6NUS6 607 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 PGAP1Q75T13 922 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 LACC1Q8IV20 430 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 RHOXF1Q8NHV9 184 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 SLC7A13Q8TCU3 470 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 TMEM203Q969S6 136 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 HYLS1Q96M11 299 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 ARHGDIGQ99819 225 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 WWTR1Q9GZV5 400 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 GPATCH2Q9NW75 528 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 COMMD3Q9UBI1 195 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 DHDHQ9UQ10 334 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 BRWD1Q9NSI6 2320 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 DLGAP1O14490 977 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 B4GAT1O43505 415 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 CASP3P42574 277 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 RAB13P51153 203 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 NDUFAF7Q7L592 441 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 CHST4Q8NCG5 386 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 OR13C2Q8NGS9 318 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 C1orf216Q8TAB5 229 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 PGAM5Q96HS1 289 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 SLC41A2Q96JW4 573 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 MRGPRX4Q96LA9 322 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 BARD1Q99728 777 aaKnown RBP6.93□□□□□ -1.3
TCF4-216ENST00000562680 VPS25Q9BRG1 176 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 FKRPQ9H9S5 495 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 LOC102725191A0A1B0GVB3 256 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 A8MV72 311 aaPredicted RBP6.93□□□□□ -1.3
TCF4-216ENST00000562680 SCGNO76038 276 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 ANKRD34CP0C6C1 535 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 ZNF883P0CG24 379 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 CKMT1AP12532 417 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 MAP2K4P45985 399 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 VEGFCP49767 419 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 MALLQ13021 153 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 MELKQ14680 651 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.93□□□□□ -1.3
TCF4-216ENST00000562680 RNF151Q2KHN1 245 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 C1orf140Q5VVS0 124 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 LIPKQ5VXJ0 399 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 TMEM236Q5W0B7 351 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 TMPPEQ6ZT21 453 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 KLBQ86Z14 1044 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 FAM181AQ8N9Y4 354 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 OR6S1Q8NH40 331 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 TGIF2Q9GZN2 237 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 NXF5Q9H1B4 397 aaKnown RBP6.93□□□□□ -1.3
TCF4-216ENST00000562680 CCDC86Q9H6F5 360 aaKnown RBP6.93□□□□□ -1.3
TCF4-216ENST00000562680 SLC25A19Q9HC21 320 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 NRG2O14511 850 aaPredicted RBP6.93□□□□□ -1.3
TCF4-216ENST00000562680 RAD1O60671 282 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 SLC43A1O75387 559 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 STK17BO94768 372 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 TNFSF15O95150 251 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 GLAP06280 429 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 PIPP12273 146 aaPredicted RBP6.93□□□□□ -1.3
TCF4-216ENST00000562680 FOLR1P15328 257 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 BMXP51813 675 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 UBE2NP61088 152 aaKnown RBP6.93□□□□□ -1.3
TCF4-216ENST00000562680 RAB12Q6IQ22 244 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms