RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 FAM32AQ9Y421 112 aaKnown RBP11.87□□□□□ -0.51
CDH1-204ENST00000562118 NOX1Q9Y5S8 564 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 LYVE1Q9Y5Y7 322 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 V9GYQ6 96 aa11.87□□□□□ -0.51
CDH1-204ENST00000562118 ALPK2Q86TB3 2170 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 DHRS12A0PJE2 317 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 FAM221AA4D161 298 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 KPNA4O00629 521 aaPredicted RBP11.86□□□□□ -0.51
CDH1-204ENST00000562118 CDC42EP2O14613 210 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 SMNDC1O75940 238 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDH1-204ENST00000562118 KRT36O76013 467 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 IGHMP01871 453 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 HLA-DOBP13765 273 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 GTF2E2P29084 291 aaKnown RBP11.86□□□□□ -0.51
CDH1-204ENST00000562118 UGT2B10P36537 528 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 SLC9A3P48764 834 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 FAM98BQ52LJ0 330 aaKnown RBP11.86□□□□□ -0.51
CDH1-204ENST00000562118 FBXW9Q5XUX1 488 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 SP5Q6BEB4 398 aaPredicted RBP11.86□□□□□ -0.51
CDH1-204ENST00000562118 TMEM225Q6GV28 225 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 ZNF770Q6IQ21 691 aaPredicted RBP11.86□□□□□ -0.51
CDH1-204ENST00000562118 TBPL2Q6SJ96 375 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 CCDC121Q6ZUS5 278 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 STK32CQ86UX6 486 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 KIF18BQ86Y91 864 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 WDFY1Q8IWB7 410 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 RNF217Q8TC41 542 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 SLCO4A1Q96BD0 722 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 APH1AQ96BI3 265 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 LRRC46Q96FV0 321 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 C12orf49Q9H741 205 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 SLC24A3Q9HC58 644 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 KCNN3Q9UGI6 736 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 PRSS50Q9UI38 385 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 TMEM5Q9Y2B1 443 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 TESMINQ9Y4I5 508 aa11.86□□□□□ -0.51
CDH1-204ENST00000562118 OR6C65A6NJZ3 312 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 RPL36A-HNRNPH2H7BZ11 118 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 MRPL33O75394 65 aaKnown RBP11.85□□□□□ -0.51
CDH1-204ENST00000562118 GADD45GO95257 159 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 ZNF26P17031 533 aaPredicted RBP11.85□□□□□ -0.51
CDH1-204ENST00000562118 ZNF43P17038 809 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 FUT1P19526 365 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 RRM2P31350 389 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 CHRNB3Q05901 458 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 RPL18Q07020 188 aaKnown RBP11.85□□□□□ -0.51
CDH1-204ENST00000562118 FAM27E3Q08E93 113 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 PMS2P3Q13401 168 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 C1QTNF12Q5T7M4 302 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 SEZ6L2Q6UXD5 910 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 ZNF730Q6ZMV8 503 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 GPAT4Q86UL3 456 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 KDM8Q8N371 416 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 POMGNT2Q8NAT1 580 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 OR4K5Q8NGD3 323 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 C14orf79Q96F83 325 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 LRR1Q96L50 414 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 LRGUKQ96M69 825 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 OR2M2Q96R28 347 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 GPX7Q96SL4 187 aaPredicted RBP11.85□□□□□ -0.51
CDH1-204ENST00000562118 SLCO5A1Q9H2Y9 848 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 CCM2LQ9NUG4 571 aaPredicted RBP11.85□□□□□ -0.51
CDH1-204ENST00000562118 VNN3Q9NY84 501 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 GPR52Q9Y2T5 361 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 CSMD2Q7Z408 3487 aa11.85□□□□□ -0.51
CDH1-204ENST00000562118 ARRDC5A6NEK1 342 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 CENPBD1B2RD01 187 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 PTP4A3O75365 173 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 GOSR1O95249 250 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 ITGA5P08648 1049 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 ADORA3P0DMS8 318 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 IFI30P13284 250 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 POU2F1P14859 743 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 CBLP22681 906 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 IGHV1-2P23083 117 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 COL8A1P27658 744 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 GSSP48637 474 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 SELENOPP49908 381 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 ZNF133P52736 654 aaPredicted RBP11.84□□□□□ -0.51
CDH1-204ENST00000562118 FXYD6P3P58550 94 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 SPIBQ01892 262 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 ITGADQ13349 1161 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 CCNIQ14094 377 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 STK11Q15831 433 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 HIST3H3Q16695 136 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 SFRP5Q5T4F7 317 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 TSPO2Q5TGU0 170 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 OR2T5Q6IEZ7 315 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 C1orf94Q6P1W5 598 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 NANOGNBQ7Z5D8 188 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 ZER1Q7Z7L7 766 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 UEVLDQ8IX04 471 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 ZNF295-AS1Q8N0V1 137 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 ZNF433Q8N7K0 673 aaPredicted RBP11.84□□□□□ -0.51
CDH1-204ENST00000562118 OR2T29Q8NH02 315 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 OR6X1Q8NH79 312 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 FAM222BQ8WU58 562 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 ZNF775Q96BV0 537 aaPredicted RBP11.84□□□□□ -0.51
CDH1-204ENST00000562118 DACH2Q96NX9 599 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 GPA33Q99795 319 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms